Pyrobaculum aerophilum Cluster B 956 proteins distance Location Strand Length PID Gene Synonym Code COG Product -103 1103829..1104122 + 97 18160428 - PAE1865 - - paREP7 -88 1903367..1903951 + 194 18161460 - PAE3195 - - "possible heat shock protein, htpX homolog part 2, authentic frameshift" -72 1481421..1482269 - 282 18160905 - PAE2479 - - enoyl-CoA hydratase -70 1282361..1282807 + 148 18160665 - PAE2173 - - "paREP2b, degenerate" -70 2083838..2084974 + 378 18161672 - PAE3467 - - hypothetical protein -69 1417333..1418064 - 243 18160829 - PAE2385 - - "transport protein part 2, authentic frameshift" -67 23237..24241 - 334 18159075 - PAE0049 - - serine protease inhibitor (serpin) -61 1695105..1695548 - 147 18161195 - PAE2866a - - conserved protein with CBS domains -61 2093922..2094782 + 286 18161689 - PAE3486 - - conserved hypothetical protein -55 214660..215607 + 315 18159318 - PAE0377 - - "cobC aminotransferase, conjectural" -49 628341..628934 - 197 18159842 - PAE1073 - - hypothetical protein -48 1046196..1046999 - 267 18160364 - PAE1780 - - "conserved protein part 2, authentic frameshift" -46 999789..1000067 + 92 18160308 - PAE1709 - - paREP2a -45 1608051..1608278 - 75 18161072 - PAE2705 - - hypothetical protein -43 15265..16158 - 297 18159065 - PAE0034 - - homoserine kinase -40 794139..794672 - 177 18160033 - PAE1334 - - possible respiratory chain protein -40 1413622..1414773 - 383 18160823 - PAE2376 - - "drug resistance protein, conjectural" -39 623959..624723 + 254 18159836 - PAE1066 - - "taurine(sulfate) transport ATP-binding protein, putative" -34 1321101..1321871 - 256 18160716 - PAE2237 - - conserved hypothetical protein -33 1608885..1609151 - 88 18161075 - PAE2708 - - hypothetical protein -31 1072651..1073472 + 273 18160397 - PAE1820 - - hypothetical protein -31 1117002..1117406 - 134 18160445 - PAE1893 - - conserved hypothetical protein -30 87429..87824 - 131 18159164 - PAE0167 - - hypothetical protein -30 574389..574946 - 185 18159775 - PAE0984 - - P. aerophilum family 70 protein -30 1458059..1458445 - 128 18160881 - PAE2452 - - paREP13 -30 1649015..1649386 + 123 18161128 - PAE2784 - - conserved hypothetical protein -30 1861604..1862137 - 177 18161406 - PAE3125 - - P. aerophilum family 70 protein -28 156806..157387 - 193 18159242 - PAE0280 - - "P. aerophilum family 70 protein," -28 1099235..1100269 + 344 18160422 - PAE1858 - - conserved within P. aerophilum -28 1133000..1134202 - 400 18160470 - PAE1924 - - 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) -28 1226885..1227628 - 247 18160591 - PAE2081 - - branched-chain amino acid transport ATP-binding protein -28 1247580..1248611 - 343 18160619 - PAE2119 - - "conjugal transfer protein, conjectural" -28 1511454..1512047 + 197 18160945 - PAE2534 - - hypothetical protein -28 1795152..1795427 - 91 18161320 - PAE3014 - - conserved within P. aerophilum -28 1823344..1824105 - 253 18161358 - PAE3065 - - "ABC-2 type transport system, membrane protein" -28 1850001..1850237 + 78 18161393 - PAE3112 - - hypothetical protein -27 780366..780608 + 80 18160012 - PAE1311 - - "conserved within P. aerophilum part 1, authentic frameshift" -27 1034650..1034772 - 40 18160350 - PAE1765a - - paREP2a -27 2159149..2159733 + 194 18161775 - PAE3601 - - uroporphyrin-III C-methyltransferase -25 54323..54703 + 126 18159113 - PAE0101 - - hypothetical protein -25 216243..217214 + 323 18159320 - PAE0381 - - cobalamin biosynthesis protein B (cbiB) -25 526519..526857 + 112 18159714 - PAE0913 - - hypothetical protein -25 1917475..1918131 + 218 18161471 - PAE3205 - - hypothetical protein -25 2139091..2139831 + 246 18161750 - PAE3568 - - conserved hypothetical protein -24 327449..327685 - 78 18159471 - PAE0612 - - conserved within P. aerophilum -24 939419..939613 - 64 18160224 - PAE1602 - - paREP2b -24 1122364..1122705 + 113 18160454 - PAE1903 - - conserved hypothetical protein -24 1317974..1318066 + 30 18160712 - PAE2231 - - paREP2b -24 1653082..1653417 + 111 18161136 - PAE2794a - - "conserved hypothetical protein part 2, authentic frameshift" -22 52315..52836 - 173 18159110 - PAE0097 - - hypothetical protein -22 311160..312053 + 297 18159451 - PAE0580 - - porphobilinogen deaminase (hemC) -22 641603..642157 + 184 18159856 - PAE1092 - - P. aerophilum family 3 protein -22 993043..994224 - 393 18160298 - PAE1695 - - paREP2b -22 1061749..1062387 + 212 18160381 - PAE1803 - - hypothetical protein -22 1749503..1750219 - 238 18161258 - PAE2942 - - conserved hypothetical protein -22 1766954..1767538 - 194 18161284 - PAE2972 - - conserved hypothetical protein -22 2203744..2204001 - 85 18161824 - PAE3660 - - conserved hypothetical protein -21 534874..535428 + 184 18159725 - PAE0926 - - conserved hypothetical protein -21 599536..599793 + 85 18159807 - PAE1024 - - "thiamine-monophosphate kinase part 1, authentic frameshift" -21 812845..813054 + 69 18160059 - PAE1368 - - "conserved hypothetical protein part 2, authentic frameshift" -21 1301357..1301902 - 181 18160688 - PAE2201 - - conserved hypothetical protein -21 1586785..1587489 - 234 18161041 - PAE2664 - - formate dehydrogenase delta subunit -19 17081..18208 - 375 18159067 - PAE0039 - - conserved hypothetical protein -19 101888..102775 - 295 18159178 - PAE0200 - - conserved hypothetical protein -19 478761..479291 + 176 18159654 - PAE0832 - - adenylate cyclase -19 626870..627409 + 179 18159838 - PAE1068 - - P. aerophilum family 3 protein -19 1032167..1032811 - 214 18160347 - PAE1763 - - conserved hypothetical protein -19 1654995..1655942 + 315 18161138 - PAE2795 - - serine protease -19 1942033..1942287 - 84 18161500 - PAE3242 - - conserved hypothetical protein -19 1944155..1944682 - 175 18161505 - PAE3246 - - conserved hypothetical protein -19 2092236..2092475 - 79 18161686 - PAE3482 - - hypothetical protein -18 236871..237203 - 110 18159358 - PAE0434 - - hypothetical protein -18 315403..316041 - 212 18159456 - PAE0589 - - hypothetical protein -18 580805..580996 + 63 18159782 - PAE0992 - - hypothetical protein -18 605091..605519 + 142 18159814 - PAE1032 - - "conserved within P. aerophilum part 1, authentic frameshift" -18 1050430..1051113 + 227 18160369 - PAE1785 - - conserved hypothetical protein -18 1139004..1139570 - 188 18160477 - PAE1934 - - conserved protein -18 1471462..1472367 - 301 18160896 - PAE2467 - - "fatty acid co-A racemase, conjectural" -18 1633202..1634227 + 341 18161106 - PAE2751 - - "cytochrome C-type biogenesis protein (ccdA), conjectural" -18 1868358..1868729 + 123 18161416 - PAE3138 - - hypothetical protein -18 2012769..2013188 + 139 18161594 - PAE3361 - - hypothetical protein -16 43478..44386 - 302 18159099 - PAE0081 - - conserved hypothetical protein -16 81756..82151 - 131 18159151 - PAE0151 - - conserved hypothetical protein -16 101069..101641 - 190 18159176 - PAE0198 - - conserved hypothetical protein -16 246298..249042 + 914 18159369 - PAE0445 - - hypothetical protein -16 605503..605901 + 132 18159815 - PAE1033 - - "conserved within P. aerophilum part 2, authentic frameshift" -16 693806..694462 + 218 18159917 - PAE1182 - - ribosomal protein S5 -16 1078546..1079076 - 176 18160406 - PAE1830 - - hypothetical protein -16 1673133..1673546 + 137 18161165 - PAE2829 - - conserved hypothetical protein -16 1816041..1816427 - 128 18161349 - PAE3053 - - hypothetical protein -16 1882342..1882995 - 217 18161432 - PAE3159 - - uridylate kinase (pyrH) -16 2128450..2128833 + 127 18161734 - PAE3548 - - hypothetical protein -15 42327..42704 - 125 18159096 - PAE0078 - - "paREP9, associated with SRSRs" -15 117827..118762 + 311 18159196 - PAE0220 - - methylenetetrahydrofolate dehydrogenase (folD) -15 160575..160967 - 130 18159245 - PAE0285 - - conserved hypothetical protein -15 170456..171220 - 254 18159262 - PAE0303 - - hypothetical protein -15 171767..171946 - 59 18159265 - PAE0307 - - conserved within P. aerophilum -15 198172..198960 + 262 18159299 - PAE0349 - - cobalamin biosynthesis precorrin-3 methylase (cbiF) -15 695921..697006 - 361 18159920 - PAE1185 - - galactokinase -15 809911..810570 + 219 18160053 - PAE1363 - - "branched-chain amino acid ABC transporter, ATP-binding protein, putative" -15 1188556..1189260 + 234 18160541 - PAE2020 - - conserved hypothetical protein -15 1299586..1300476 - 296 18160684 - PAE2197 - - predicted phosphoesterase -15 1396591..1397226 - 211 18160801 - PAE2348 - - conserved hypothetical protein -15 1431845..1432288 + 147 18160849 - PAE2408 - - hypothetical protein -15 1592309..1592833 - 174 18161051 - PAE2679 - - "transcriptional regulator, conjectural" -15 1758799..1759206 + 135 18161270 - PAE2955 - - conserved hypothetical protein -15 2089005..2089550 - 181 18161680 - PAE3475 - - indolepyruvate ferredoxin oxidoreductase beta subunit -15 2141661..2142320 + 219 18161753 - PAE3571 - - "ABC transporter ATP-binding protein, putative" -15 2175987..2176547 - 186 18161791 - PAE3618 - - hypothetical protein -14 450552..450869 - 105 18159633 - PAE0810 - - mutT/nudix family protein -14 450855..451049 + 64 18159634 - PAE0811 - - hypothetical protein -14 700969..701499 - 176 18159926 - PAE1194 - - hypothetical protein -14 701485..701787 + 100 18159927 - PAE1195 - - hypothetical protein -13 3784..4143 + 119 18159045 - PAE0008 - - hypothetical protein -13 57805..60177 - 790 18159119 - PAE0109 - - conserved hypothetical protein -13 88870..89463 + 197 18159167 - PAE0171 - - conserved hypothetical protein -13 176474..177199 + 241 18159273 - PAE0316 - - "ABC-2 type transport system, membrane protein" -13 191798..192757 - 319 18159290 - PAE0339 - - cobalamin biosynthesis protein G (cbiG) -13 215594..216268 + 224 18159319 - PAE0379 - - cobalamin (5'-phosphate) synthase (cobS) -13 487555..487734 + 59 18159667 - PAE0846 - - paREP2a -13 534081..534620 + 179 18159723 - PAE0924 - - conserved hypothetical protein -13 633095..633655 + 186 18159847 - PAE1078 - - P. aerophilum family 79 protein -13 728357..729232 + 291 18159964 - PAE1247 - - manganese transport permease protein -13 797225..797674 - 149 18160036 - PAE1338 - - cytochrome C oxidase subunit II -13 861572..861769 - 65 18160122 - PAE1459 - - "paREP9, associated with SRSRs, authentic frameshift" -13 870482..871051 - 189 18160135 - PAE1481 - - phenylacrylic acid decarboxylase homolog -13 922008..922115 - 35 18160201 - PAE1570 - - paREP2a -13 981371..982204 + 277 18160282 - PAE1673 - - paREP2a -13 985918..986946 + 342 18160291 - PAE1685 - - glycerol dehydrogenase (gldA) -13 1509879..1510388 + 169 18160943 - PAE2531 - - conserved hypothetical protein -13 1580933..1581493 - 186 18161037 - PAE2659 - - formate dehydrogenase protein fdhE -13 1811898..1812617 - 239 18161344 - PAE3045 - - pcrB homolog -13 1916232..1917500 + 422 18161470 - PAE3204 - - hypothetical protein -12 27665..27799 - 44 18159080 - PAE0056 - - hypothetical protein -12 101625..101900 - 91 18159177 - PAE0199 - - conserved hypothetical protein -12 194282..195235 + 317 18159294 - PAE0343 - - cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase) -12 547327..547626 - 99 18159739 - PAE0941 - - hypothetical protein -12 828591..829328 - 245 18160075 - PAE1389 - - branched-chain amino acid transport ATP-binding protein -12 913961..914548 - 195 18160194 - PAE1561 - - nucleoside diphosphate kinase (ndk) -12 1180558..1181397 + 279 18160529 - PAE2004 - - serine/threonine specific protein phosphatase -12 1957973..1958866 - 297 18161520 - PAE3263 - - dihydroorotate dehydrogenase (pyrD) -10 42689..43204 - 171 18159097 - PAE0079 - - conserved hypothetical protein -10 87061..87432 + 123 18159163 - PAE0166 - - paREP11 -10 107626..109290 - 554 18159185 - PAE0208 - - "helicase, probable" -10 118752..119684 + 310 18159197 - PAE0221 - - phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (purM) -10 134977..136785 - 602 18159214 - PAE0245 - - conserved hypothetical protein -10 211040..212035 - 331 18159313 - PAE0371 - - conserved hypothetical protein -10 259434..259526 - 30 18159382 - PAE0469 - - hypothetical protein -10 259516..259680 + 54 18159383 - PAE0470 - - hypothetical protein -10 436657..437817 - 386 18159611 - PAE0782 - - conserved protein (possible hflX) -10 496670..496855 + 61 18159669 - PAE0852 - - paREP2b -10 551243..554317 + 1024 18159745 - PAE0947 - - carbamoyl-phosphate synthase large subunit -10 694975..695931 - 318 18159919 - PAE1184 - - galactose-1-phosphate uridylyltransferase -10 709547..710389 - 280 18159938 - PAE1211 - - paREP2a -10 720607..721098 + 163 18159949 - PAE1224 - - conserved hypothetical protein -10 838988..839398 + 136 18160087 - PAE1406 - - conserved within P. aerophilum -10 840609..841052 + 147 18160089 - PAE1408 - - hypothetical protein -10 922102..922947 - 281 18160202 - PAE1571 - - paREP2a -10 1034745..1034996 - 83 18160351 - PAE1766 - - paREP2a -10 1171408..1171875 + 155 18160518 - PAE1990 - - conserved hypothetical protein -10 1250204..1251043 - 279 18160623 - PAE2125 - - paREP2a -10 1314369..1314854 - 161 18160707 - PAE2224 - - conserved hypothetical protein -10 1331402..1331917 + 171 18160726 - PAE2248 - - hypothetical protein -10 1384988..1385608 - 206 18160786 - PAE2328 - - conserved hypothetical protein -10 1625703..1626656 + 317 18161095 - PAE2737 - - 2-oxoacid ferredoxin oxidoreductase beta subunit -10 1635106..1635507 - 133 18161108 - PAE2754 - - conserved hypothetical protein -10 1763873..1765585 + 570 18161281 - PAE2969 - - glutamyl-tRNA synthetase -10 1977280..1977507 - 75 18161547 - PAE3299 - - acetolactate synthase small subunit -10 2034162..2034644 + 160 18161619 - PAE3403 - - conserved within P. aerophilum -10 2077369..2078175 + 268 18161664 - PAE3457 - - "maltose ABC transporter, permease protein" -10 2180581..2181525 + 314 18161797 - PAE3625 - - hypothetical protein -9 82432..83343 - 303 18159153 - PAE0153 - - hypothetical protein -9 140805..141371 + 188 18159221 - PAE0254 - - "P. aerophilum family 577 protein, associated with P. aerophilum family 562, degenerate" -9 398840..399196 + 118 18159560 - PAE0719 - - succinate dehydrogenase subunit D (sdhD) -9 827896..828600 - 234 18160074 - PAE1388 - - branched-chain amino acid transport ATP-binding protein -9 1355108..1355872 - 254 18160756 - PAE2286 - - "ABC transporter ATP-binding protein, putative" -9 1400027..1400260 - 77 18160806 - PAE2354 - - hypothetical protein -9 1462748..1463326 - 192 18160888 - PAE2459 - - anthranilate synthase component II -9 1540714..1541409 + 231 18160983 - PAE2582 - - thiosulfate sulfurtransferase -9 1872946..1873608 + 220 18161421 - PAE3145 - - conserved hypothetical protein -9 2039154..2040014 - 286 18161626 - PAE3411 - - sugar transport permease protein -7 197561..198187 + 208 18159298 - PAE0348 - - cobalamin biosynthesis precorrin-3 methylase (cbiF) -7 261627..264002 + 791 18159389 - PAE0478 - - hypothetical protein -7 367102..367536 + 144 18159519 - PAE0669 - - "transcription termination factor NusA, putative" -7 586648..587178 + 176 18159789 - PAE1000 - - P. aerophilum family 3 protein -7 589665..590918 + 417 18159792 - PAE1003 - - asparaginase (asnA) -7 705298..706509 + 403 18159934 - PAE1204 - - pantothenate metabolism flavoprotein (dfp) -7 715849..716328 - 159 18159944 - PAE1218 - - conserved hypothetical protein -7 735978..739499 + 1173 18159972 - PAE1265 - - "molybdopterin oxidoreductase, molybdopterin binding subunit" -7 803665..803922 + 85 18160045 - PAE1352 - - hypothetical protein -7 894220..894642 + 140 18160169 - PAE1529 - - "conserved within P. aerophilum, partially with both neighbors" -7 964350..964799 - 149 18160262 - PAE1647 - - hypothetical protein -7 1080153..1081013 - 286 18160409 - PAE1836 - - hypothetical protein -7 1165246..1165890 + 214 18160512 - PAE1983 - - "aerolysin, part 2, authentic frameshift" -7 1320520..1320870 + 116 18160715 - PAE2234 - - conserved hypothetical protein -7 1322918..1323997 - 359 18160719 - PAE2239 - - hypothetical protein -7 1425612..1425911 + 99 18160840 - PAE2397 - - hypothetical protein -7 1428496..1428834 + 112 18160844 - PAE2402 - - hypothetical protein -7 1437273..1437785 + 170 18160853 - PAE2414 - - hypothetical protein -7 1743917..1744501 + 194 18161252 - PAE2936 - - conserved hypothetical protein -7 1765578..1766570 + 330 18161282 - PAE2970 - - conserved hypothetical protein -7 1808209..1808691 - 160 18161336 - PAE3035 - - hypothetical protein -7 1822587..1823351 - 254 18161357 - PAE3064 - - "ABC-2 type transport system, membrane protein" -7 2010262..2011686 + 474 18161592 - PAE3357 - - "antibiotic resistance (efflux) protein, conjectural" -7 2036523..2037302 - 259 18161622 - PAE3407 - - conserved hypothetical protein -7 2108235..2108954 - 239 18161711 - PAE3515 - - conserved within P. aerophilum -7 2209997..2211091 + 364 18161832 - PAE3672 - - pyruvate formate-lyase activating enzyme homolog -6 105739..106782 - 347 18159182 - PAE0205 - - conserved hypothetical protein -6 173486..173884 - 132 18159268 - PAE0311 - - hypothetical protein -6 220627..221037 + 136 18159329 - PAE0396 - - hypothetical protein -6 232338..232556 + 72 18159352 - PAE0427 - - conserved hypothetical protein -6 344633..344986 + 117 18159492 - PAE0640 - - hypothetical protein -6 347756..347971 - 71 18159498 - PAE0648 - - paREP10 -6 1135208..1136152 - 314 18160472 - PAE1927 - - transketolase (C terminal section) -6 1603314..1604045 - 243 18161066 - PAE2697 - - "transport protein, putative" -6 1609397..1609858 - 153 18161077 - PAE2712 - - conserved hypothetical protein -3 10815..11417 + 200 18159057 - PAE0023 - - "sulfate transport system, ATP-binding protein, putative" -3 30629..32437 - 602 18159083 - PAE0062 - - "molybdenum transport system permease protein, putative" -3 35472..36290 - 272 18159089 - PAE0067 - - conserved hypothetical protein -3 36287..38116 - 609 18159090 - PAE0068 - - "helicase, probable" -3 43194..43481 - 95 18159098 - PAE0080 - - conserved hypothetical protein -3 48829..48975 - 48 18159106 - PAE0089 - - hypothetical protein -3 61084..61968 - 294 18159121 - PAE0112 - - hypothetical protein -3 61965..62891 - 308 18159122 - PAE0114 - - conserved hypothetical protein -3 73722..74171 + 149 18159135 - PAE0129 - - conserved hypothetical protein -3 75306..75926 - 206 18159138 - PAE0134 - - hypothetical protein -3 117018..117842 + 274 18159195 - PAE0219 - - phosphoribosylglycinamide formyltransferase -3 119681..120319 - 212 18159198 - PAE0222 - - phosphoribosylformylglycinamidine synthase I (FGAM synthase I) (purQ) -3 133123..134535 + 470 18159212 - PAE0243 - - hypothetical protein -3 145163..145501 + 112 18159226 - PAE0263 - - hypothetical protein -3 149342..150106 + 254 18159233 - PAE0270 - - membrane protein -3 163159..163416 - 85 18159249 - PAE0290 - - hypothetical protein -3 164489..165313 + 274 18159252 - PAE0294 - - P. aerophilum family 322 protein -3 191049..191489 + 146 18159288 - PAE0337 - - conserved hypothetical protein -3 195959..196981 + 340 18159296 - PAE0346 - - cobalamin biosynthesis protein D (cbiD) -3 196978..197568 + 196 18159297 - PAE0347 - - cobalamin biosynthesis precorrin-8W decarboxylase (cbiT) -3 205916..206833 - 305 18159308 - PAE0366 - - "iron (III) dicitrate transport system, permease protein, putative" -3 213891..214715 + 274 18159317 - PAE0376 - - asparagine synthetase (asnB) -3 230643..231641 + 332 18159349 - PAE0423 - - P. aerophilum family 1964 protein -3 237185..237970 - 261 18159359 - PAE0435 - - hypothetical protein -3 289194..290345 + 383 18159424 - PAE0541 - - glycosyltransferase (type 1) -3 291498..292664 - 388 18159426 - PAE0543 - - glycosyltransferase (type 1) -3 335986..336321 + 111 18159481 - PAE0626 - - hypothetical protein -3 350204..351814 + 536 18159502 - PAE0653 - - conserved hypothetical protein -3 357390..359171 + 593 18159511 - PAE0663 - - H+-transporting ATP synthase subunit A (atpA) -3 369192..369755 + 187 18159523 - PAE0673 - - ribosomal protein L13 -3 370195..370395 + 66 18159525 - PAE0675a - - DNA-directed RNA polymerase subunit N (rpoN) -3 370700..371908 + 402 18159527 - PAE0677 - - S-adenosylmethionine synthetase -3 376969..377772 - 267 18159535 - PAE0686 - - multiple sugar transport permease protein -3 377769..378593 - 274 18159536 - PAE0688 - - multiple sugar transport permease protein -3 384321..384542 + 73 18159542 - PAE0697 - - hypothetical protein -3 416680..417966 - 428 18159587 - PAE0749 - - conserved protein (nfeD homolog) -3 419659..420687 + 342 18159590 - PAE0753 - - H+-transporting ATP synthase subunit C (atpC) -3 482857..483534 + 225 18159659 - PAE0837 - - sugar-phosphate nucleotidyl transferase -3 499381..500382 + 333 18159675 - PAE0865 - - tRNA pseudouridine synthase B -3 501715..502647 + 310 18159679 - PAE0870 - - conserved NAD/P oxidoreductase -3 506474..506707 + 77 18159686 - PAE0878 - - hypothetical protein -3 535953..536549 - 198 18159727 - PAE0928 - - hypothetical protein -3 536546..537727 - 393 18159728 - PAE0929 - - hypothetical protein -3 537724..538089 - 121 18159729 - PAE0929a - - hypothetical protein -3 540884..542125 - 413 18159732 - PAE0933 - - conserved hypothetical protein -3 580134..580823 + 229 18159781 - PAE0991 - - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA) -3 590915..591445 + 176 18159793 - PAE1004 - - conserved hypothetical protein -3 609616..609924 + 102 18159822 - PAE1041 - - pyruvate ferredoxin oxidoreductase delta subunit (porD) -3 611099..612043 + 314 18159824 - PAE1043 - - pyruvate ferredoxin oxidoreductase beta subunit (porB) -3 649365..649853 + 162 18159865 - PAE1106 - - conserved hypothetical protein -3 677597..678004 - 135 18159896 - PAE1155 - - conserved hypothetical protein -3 694459..694995 + 178 18159918 - PAE1183 - - ribosomal protein L30 -3 747870..749078 - 402 18159980 - PAE1273 - - "glycosyl transferase, conjectural" -3 754676..755836 - 386 18159988 - PAE1282 - - glycolate oxidase subunit glcF -3 755833..756816 - 327 18159989 - PAE1284 - - glycolate oxidase subunit glcE -3 761694..762833 + 379 18159993 - PAE1289 - - conserved hypothetical protein -3 766253..767215 - 320 18159999 - PAE1296 - - dipeptide transport ATP-binding protein -3 767212..768180 - 322 18160000 - PAE1297 - - dipeptide transport ATP-binding protein -3 782751..783824 - 357 18160019 - PAE1321 - - multiple sugar-binding transport ATP-binding -3 784651..785529 - 292 18160021 - PAE1323 - - multiple sugar transport permease -3 788151..788990 + 279 18160027 - PAE1328 - - conserved hypothetical protein -3 794632..794826 - 64 18160034 - PAE1336 - - possible respiratory chain protein -3 802099..803340 + 413 18160043 - PAE1350 - - cytochrome b/b6 -3 841049..841765 + 238 18160090 - PAE1409 - - hypothetical protein -3 850362..850898 + 178 18160105 - PAE1433 - - "P. aerophilum family 322 protein part 1, authentic frameshift" -3 887836..888798 + 320 18160162 - PAE1519 - - conserved hypothetical protein -3 910845..911735 - 296 18160191 - PAE1558 - - 2-oxoacid ferredoxin oxidoreductase beta subunit -3 924569..926014 - 481 18160205 - PAE1576 - - NADH-ubiquinone oxidoreductase subunit -3 926827..927294 - 155 18160208 - PAE1580 - - NADH-ubiquinone oxidoreductase subunit -3 931964..932638 + 224 18160216 - PAE1589 - - 3-oxoacyl-(acyl carrier protein) reductase -3 954788..955879 + 363 18160247 - PAE1628 - - "N2,N2-dimethylguonasine tRNA methyltransferase" -3 963394..964353 - 319 18160261 - PAE1646 - - replication factor C small subunit -3 982745..983020 - 91 18160285 - PAE1676 - - hypothetical protein -3 983017..983421 - 134 18160286 - PAE1677 - - conserved hypothetical protein -3 1028951..1029253 - 100 18160344 - PAE1760 - - conserved hypothetical protein -3 1034552..1034653 - 33 18160349 - PAE1765 - - hypothetical protein -3 1098229..1099263 + 344 18160421 - PAE1857 - - conserved within P. aerophilum -3 1107855..1108283 + 142 18160433 - PAE1873 - - conserved protein with 2 CBS domains -3 1124995..1126101 - 368 18160460 - PAE1912 - - chorismate synthase (aroC) -3 1134174..1135211 - 345 18160471 - PAE1926 - - 3-dehydroquinate synthase -3 1139552..1141723 - 723 18160478 - PAE1935 - - "carbon monoxide dehydrogenase large subunit, conjectural" -3 1141720..1142163 - 147 18160479 - PAE1936 - - "carbon monoxide dehydrogenase small subunit, conjectural" -3 1144439..1144933 - 164 18160483 - PAE1944 - - hypothetical protein -3 1144930..1147167 - 745 18160484 - PAE1946 - - hypothetical protein -3 1160350..1160595 + 81 18160504 - PAE1972 - - ribosomal protein L23 -3 1163277..1163942 + 221 18160509 - PAE1979 - - conserved hypothetical protein -3 1163939..1164688 + 249 18160510 - PAE1981 - - hypothetical protein -3 1192251..1193801 - 516 18160548 - PAE2028 - - N-methylhydantoinase B (hyuB) -3 1198796..1199275 - 159 18160554 - PAE2037 - - hypothetical protein -3 1201144..1202058 - 304 18160557 - PAE2040 - - hypothetical protein -3 1204270..1205445 - 391 18160561 - PAE2044 - - "P. aerophilum family 417, putative ATP binding" -3 1222151..1222960 + 269 18160584 - PAE2074 - - conserved hypothetical protein -3 1226187..1226888 - 233 18160590 - PAE2080 - - branched-chain amino acid transport ATP-binding protein -3 1230010..1231095 + 361 18160594 - PAE2084 - - branched-chain amino acid transport permease protein -3 1275987..1276388 - 133 18160656 - PAE2162 - - Holliday Junction Resolvase -3 1276385..1276873 - 162 18160657 - PAE2163 - - hypothetical protein -3 1292783..1293835 + 350 18160676 - PAE2185 - - 3-oxoacyl-[acyl-carrier-protein] synthase -3 1334062..1334535 + 157 18160730 - PAE2253 - - mutT/nudix family protein -3 1343766..1344317 + 183 18160743 - PAE2269 - - tRNA intron endonuclease -3 1353279..1355111 - 610 18160755 - PAE2285 - - hypothetical protein -3 1377213..1378424 + 403 18160778 - PAE2316 - - threonine dehydratase (ilvA) -3 1387774..1388742 - 322 18160790 - PAE2332 - - alcohol dehydrogenase (Zinc) -3 1426609..1428141 + 510 18160842 - PAE2399 - - "type II secretion system protein, conjectural" -3 1438245..1438538 + 97 18160856 - PAE2417 - - hypothetical protein -3 1454755..1455891 + 378 18160876 - PAE2447 - - conserved hypothetical protein -3 1467115..1469160 - 681 18160893 - PAE2464 - - ABC transporter ATP-binding component -3 1474099..1474443 + 114 18160899 - PAE2472 - - conserved protein associated with acetyl-CoA C-acyltransferase -3 1488413..1489600 + 395 18160913 - PAE2488 - - acetyl-CoA C-acyltransferase -3 1489597..1490136 + 179 18160914 - PAE2489 - - conserved protein associated with acetyl-CoA C-acyltransferase -3 1490561..1491703 + 380 18160916 - PAE2491 - - acyl-CoA dehydrogenase -3 1536116..1536370 - 84 18160977 - PAE2574 - - hypothetical protein -3 1537172..1537783 - 203 18160979 - PAE2576 - - hypothetical protein -3 1550693..1552399 + 568 18160999 - PAE2603 - - conserved protein with C terminal acylphosphatase domain -3 1552396..1552764 + 122 18161000 - PAE2604 - - conserved hypothetical protein -3 1562501..1563691 - 396 18161014 - PAE2628 - - "flavoprotein reductase, conjectural" -3 1563688..1564443 - 251 18161015 - PAE2630 - - conserved hypothetical protein -3 1577327..1578001 + 224 18161031 - PAE2651 - - lipoate protein ligase B -3 1591505..1591882 - 125 18161049 - PAE2676 - - conserved hypothetical protein -3 1595400..1595780 - 126 18161056 - PAE2686 - - glcG homolog -3 1595777..1596772 - 331 18161057 - PAE2687 - - alcohol dehydrogenase (Zinc) -3 1599412..1599846 - 144 18161061 - PAE2691 - - conserved protein with 2 CBS domains -3 1646026..1646895 + 289 18161123 - PAE2778 - - "type II secretion system protein, conjectural" -3 1646892..1647677 + 261 18161124 - PAE2779 - - hypothetical protein -3 1655939..1656271 - 110 18161139 - PAE2796 - - conserved hypothetical protein -3 1658863..1659147 + 94 18161143 - PAE2800 - - P. aerophilum family 453 -3 1667372..1667986 + 204 18161155 - PAE2820 - - conserved hypothetical protein -3 1690389..1690955 + 188 18161189 - PAE2860 - - "molybdopterin oxidoreductase, iron-sulfur binding subunit" -3 1690952..1691824 + 290 18161190 - PAE2861 - - "molybdopterin oxidoreductase, membrane subunit" -3 1695487..1697175 - 562 18161196 - PAE2866 - - "sugar transporter, putative" -3 1703565..1704560 - 331 18161205 - PAE2877 - - aspartate kinase -3 1706448..1707503 + 351 18161209 - PAE2881 - - N-acetyl-gamma-glutamyl-phosphate reductase (argC) -3 1707500..1708285 + 261 18161210 - PAE2882 - - acetylglutamate kinase (argB) -3 1713109..1713840 + 243 18161217 - PAE2891 - - spermidine/putrescine transport permease protein -3 1713837..1714598 + 253 18161218 - PAE2893 - - spermidine/putrescine transport permease protein -3 1714849..1715928 - 359 18161219 - PAE2895 - - "conserved hypothetical protein, authentic frameshift" -3 1721465..1723291 + 608 18161226 - PAE2903 - - conserved hypothetical protein -3 1723288..1724445 + 385 18161227 - PAE2904 - - "exonuclease sbcD, conjectural" -3 1728943..1729767 + 274 18161232 - PAE2910 - - hypothetical protein -3 1740816..1741877 - 353 18161247 - PAE2931 - - alcohol dehydrogenase (Zinc) -3 1755204..1755968 - 254 18161265 - PAE2948 - - hypothetical protein -3 1761069..1761590 - 173 18161273 - PAE2960 - - conserved hypothetical protein -3 1762355..1762780 - 141 18161276 - PAE2965 - - hypothetical protein -3 1762777..1762914 - 45 18161277 - PAE2966 - - hypothetical protein -3 1770949..1771728 + 259 18161289 - PAE2979 - - methyltransferase -3 1775219..1775902 + 227 18161296 - PAE2985 - - "riboflavin specific deaminase, putative" -3 1806644..1806862 - 72 18161332 - PAE3031 - - conserved hypothetical protein -3 1830510..1831409 - 299 18161369 - PAE3083 - - asparaginase -3 1850685..1852232 - 515 18161395 - PAE3114 - - nicotinate-nucleotide pyrophosphorylase AND conserved protein -3 1854520..1855410 - 296 18161400 - PAE3118 - - "ribose ABC transporter, permease protein" -3 1855407..1856414 - 335 18161401 - PAE3119 - - "ribose ABC transporter, permease protein" -3 1875563..1876045 - 160 18161425 - PAE3151 - - hypothetical protein -3 1905244..1907256 - 670 18161462 - PAE3197 - - hypothetical protein -3 1921102..1921944 + 280 18161475 - PAE3209 - - conserved hypothetical protein -3 1927517..1928266 + 249 18161483 - PAE3217 - - conserved hypothetical protein -3 1975373..1976284 - 303 18161545 - PAE3297 - - branched-chain amino acid aminotransferase (ilvE) -3 1988828..1989847 + 339 18161562 - PAE3321 - - aminotransferase (class 5) -3 1992344..1992907 - 187 18161566 - PAE3326 - - conserved hypothetical protein -3 1993374..1994270 - 298 18161568 - PAE3329 - - transcription initiation factor IIB (TFIIB) -3 1995017..1995304 + 95 18161572 - PAE3332 - - signal recognition particle -3 2002520..2002696 + 58 18161584 - PAE3345 - - ribosomal protein L24 -3 2003184..2004275 - 363 18161586 - PAE3348 - - branched-chain amino acid transport permease protein -3 2040005..2040967 - 320 18161627 - PAE3412 - - "ribose ABC transporter, permease protein" -3 2058399..2059778 - 459 18161644 - PAE3435 - - preprotein translocase secY subunit -3 2062538..2062654 - 38 18161649 - PAE3440 - - "conserved hypothetical protein part 2, authentic frameshift" -3 2094779..2095657 + 292 18161690 - PAE3487 - - deoxyhypusine synthase -3 2106812..2107567 + 251 18161709 - PAE3513 - - "resolvase, conjectural" -3 2132804..2133847 + 347 18161741 - PAE3560 - - hypothetical protein -3 2145000..2146244 + 414 18161759 - PAE3578 - - sun family protein -3 2147397..2148743 - 448 18161761 - PAE3581 - - conserved hypothetical protein -3 2165030..2166370 + 446 18161781 - PAE3608 - - hypothetical protein -3 2192513..2193355 - 280 18161812 - PAE3643 - - hypothetical protein 0 18189..20180 - 663 18159068 - PAE0040 - - conserved within P. aerophilum 0 25782..27665 - 627 18159079 - PAE0055 - - hypothetical protein 0 56712..57329 + 205 18159117 - PAE0106 - - hypothetical protein 0 57434..57805 - 123 18159118 - PAE0108 - - hypothetical protein 0 162146..163159 - 337 18159248 - PAE0289 - - "metallo cofactor biosynthesis protein, conjectural" 0 355982..356476 + 164 18159508 - PAE0660 - - conserved hypothetical protein 0 368019..368801 + 260 18159521 - PAE0671 - - DNA-directed RNA polymerase subunit D (rpoD) 0 408454..409722 + 422 18159574 - PAE0735 - - replication factor C large subunit 0 409722..410018 + 98 18159575 - PAE0736 - - hypothetical protein 0 446088..447146 - 352 18159625 - PAE0801 - - conserved protein (possible oxidoreductase) 0 456451..457296 + 281 18159641 - PAE0818 - - conserved hypothetical protein 0 594437..595180 - 247 18159798 - PAE1012 - - conserved hypothetical protein 0 609924..611102 + 392 18159823 - PAE1042 - - pyruvate ferredoxin oxidoreductase alpha subunit (porA) 0 708014..709420 + 468 18159937 - PAE1209 - - 4-alpha-glucanotransferase (malQ) 0 792839..793267 - 142 18160031 - PAE1332 - - conserved hypothetical protein 0 794823..797225 - 800 18160035 - PAE1337 - - cytochrome C oxidase subunit I /III 0 798929..800872 + 647 18160040 - PAE1345 - - hypothetical protein 0 830275..831147 - 290 18160077 - PAE1391 - - branched-chain amino acid transport permease protein 0 957978..958970 - 330 18160252 - PAE1635 - - conserved hypothetical protein 0 997704..999581 - 625 18160305 - PAE1706 - - paREP2b 0 999581..999664 + 27 18160306 - PAE1707 - - paREP2a 0 1014320..1014403 - 27 18160328 - PAE1733 - - paREP2a 0 1014403..1016325 + 640 18160329 - PAE1734 - - paREP2b 0 1043131..1043802 + 223 18160358 - PAE1774 - - conserved hypothetical protein 0 1116137..1116712 + 191 18160443 - PAE1891 - - conserved hypothetical protein 0 1122765..1123244 - 159 18160455 - PAE1905 - - "P. aerophilum family 322 protein part 2, authentic frameshift" 0 1149483..1150721 - 412 18160491 - PAE1956 - - hypothetical protein 0 1336685..1336921 - 78 18160734 - PAE2257 - - hypothetical protein 0 1379169..1380695 + 508 18160780 - PAE2319 - - hypothetical protein 0 1384745..1385032 + 95 18160785 - PAE2326a - - hypothetical protein 0 1394791..1395426 - 211 18160798 - PAE2343 - - hypothetical protein 0 1422003..1422791 - 262 18160835 - PAE2392 - - dipeptide transport permease 0 1573862..1574824 + 320 18161028 - PAE2646 - - pyruvate dehydrogenase E1 beta subunit 0 1574824..1575975 + 383 18161029 - PAE2648 - - pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase) 0 1608595..1608885 - 96 18161074 - PAE2707 - - hypothetical protein 0 1610178..1611008 + 276 18161079 - PAE2715 - - cation efflux system protein 0 1614998..1615483 - 161 18161084 - PAE2723 - - P. aerophilum family 79 protein 0 1623848..1625713 + 621 18161094 - PAE2736 - - 2-oxoacid ferredoxin oxidoreductase alpha subunit 0 1678251..1679360 - 369 18161172 - PAE2839 - - "molybdopterin oxidoreductase, molybdopterin binding subunit part 2, authentic frameshift" 0 1717645..1718937 - 430 18161222 - PAE2899 - - conserved hypothetical protein 0 1748886..1749503 - 205 18161257 - PAE2941 - - conserved hypothetical protein 0 1842693..1843355 + 220 18161381 - PAE3097 - - translation initiation factor aIF-6 0 1844048..1844965 + 305 18161384 - PAE3100 - - "signal recognition particle protein (docking protein), probable" 0 1856411..1857847 - 478 18161402 - PAE3120 - - ribose ABC transport system ATP-binding 0 1895000..1895272 + 90 18161448 - PAE3180 - - hypothetical protein 0 1901244..1902008 + 254 18161455 - PAE3188 - - hypothetical protein 0 1995304..1996053 + 249 18161573 - PAE3333 - - conserved hypothetical protein 0 2068641..2069006 - 121 18161654 - PAE3445 - - conserved within P. aerophilum 0 2084945..2085604 - 219 18161673 - PAE3468 - - conserved hypothetical protein 1 816378..817262 - 294 18160062 - PAE1372 - - conserved hypothetical protein 1 1063500..1063745 + 81 18160384 - PAE1805 - - hypothetical protein 1 1183777..1184349 + 190 18160532 - PAE2006 - - P. aerophilum family 3 protein 1 1216201..1217016 - 271 18160576 - PAE2060 - - "conserved within P. aerophilum, part 2, authentic frameshift" 1 1447602..1448633 - 343 18160866 - PAE2430 - - o-syaloglycoprotein endopeptidase 1 1864890..1865189 + 99 18161411 - PAE3132 - - conserved hypothetical protein 1 2057188..2058000 - 270 18161641 - PAE3431 - - conserved hypothetical protein 1 2173709..2174407 + 232 18161788 - PAE3614 - - hypothetical protein 1 2203979..2204521 - 180 18161825 - PAE3662 - - hypothetical protein 2 306065..307024 - 319 18159444 - PAE0568 - - "cation efflux system protein, conjectural" 2 397717..398430 + 237 18159558 - PAE0717 - - succinate dehydrogenase iron-sulfur subunit (sdhB) 2 522079..522456 + 125 18159706 - PAE0904 - - conserved hypothetical protein 2 817701..818249 - 182 18160064 - PAE1375 - - conserved protein associated with acetyl-CoA C-acyltransferase 2 1013667..1014107 + 146 18160326 - PAE1730 - - ribosomal protein S17 2 1148686..1149048 - 120 18160489 - PAE1954 - - hypothetical protein 2 1237621..1238238 + 205 18160606 - PAE2101 - - ribosomal protein L18 2 1302800..1303624 - 274 18160691 - PAE2206 - - 3' exoribonuclease family protein 2 1360689..1361663 + 324 18160762 - PAE2295 - - conserved hypothetical protein 2 1564440..1565738 - 432 18161016 - PAE2631 - - hypothetical protein 2 1567486..1568733 + 415 18161021 - PAE2635 - - conserved hypothetical protein 2 1628145..1629473 + 442 18161100 - PAE2743 - - fumarate hydratase class II 2 1651508..1651978 - 156 18161133 - PAE2789 - - conserved within P. aerophilum 2 1799463..1800554 - 363 18161327 - PAE3024 - - sugar-phosphate nucleotidyl transferase 2 2040964..2042358 - 464 18161628 - PAE3413 - - ribose ABC transport system ATP-binding protein 2 2054507..2055958 + 483 18161639 - PAE3429 - - "glycogen synthase (starch (bacterial glycogen) synthase), putative" 2 2095659..2096621 + 320 18161691 - PAE3488 - - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase 3 78825..79163 - 112 18159147 - PAE0144 - - conserved hypothetical protein 3 115885..117021 + 378 18159194 - PAE0218 - - amidophosphoribosyltransferase (purF) 3 122811..124073 + 420 18159202 - PAE0226 - - amidophosphoribosyltransferase (purF) 3 203378..204043 - 221 18159305 - PAE0360 - - "ABC transporter, ATP-binding protein" 3 222640..222990 + 116 18159333 - PAE0401 - - conserved hypothetical protein 3 226651..226935 + 94 18159340 - PAE0411 - - hypothetical protein 3 560482..560592 + 36 18159753 - PAE0955 - - paREP2a 3 803343..803672 + 109 18160044 - PAE1351 - - hypothetical protein 3 808204..808818 + 204 18160051 - PAE1361 - - hypothetical protein 3 1190373..1190741 + 122 18160544 - PAE2024 - - conserved hypothetical protein 3 1528762..1529034 + 90 18160966 - PAE2562 - - "adenylylsulfate reductase beta subunit part 2, authentic frameshift" 3 1738200..1738733 - 177 18161244 - PAE2926 - - NADH-ubiquinone oxidoreductase subunit 4 431596..433080 + 494 18159605 - PAE0773 - - "conserved protein (possible type II secretion, gsp)" 4 571613..571840 + 75 18159771 - PAE0978 - - hypothetical protein 4 812240..812866 + 208 18160058 - PAE1367 - - "conserved hypothetical protein part 1, authentic frameshift" 4 1011361..1012242 - 293 18160323 - PAE1726 - - conserved within P. aerophilum 4 1621041..1621577 + 178 18161089 - PAE2731 - - hypothetical protein 4 1928256..1929119 - 287 18161484 - PAE3218 - - conserved hypothetical protein 5 530491..530757 + 88 18159717 - PAE0917 - - "P. aerophilum family 1964 protein part 2, authentic frameshift" 5 1007099..1007626 + 175 18160318 - PAE1719 - - P. aerophilum family 550 protein 5 1300461..1300736 - 91 18160685 - PAE2198 - - hypothetical protein 5 1425023..1425619 + 198 18160839 - PAE2396 - - hypothetical protein 5 1432293..1433390 + 365 18160850 - PAE2409 - - hypothetical protein 6 568207..569418 - 403 18159766 - PAE0972 - - adenylosuccinate lyase (purB) 6 937761..938396 + 211 18160221 - PAE1598 - - uracil phosphoribosyltransferase 6 1933477..1934031 + 184 18161491 - PAE3225 - - cytidylate kinase (cmk) 7 769243..770241 - 332 18160002 - PAE1299 - - "dipeptide ABC transporter, permease protein" 7 914536..914682 - 48 18160195 - PAE1562 - - paREP2a 7 939053..939412 - 119 18160223 - PAE1600 - - paREP2b 7 1458989..1460128 - 379 18160883 - PAE2454 - - conserved hypothetical protein 7 1530431..1530919 + 162 18160968 - PAE2564 - - "adenylylsulfate reductase alpha subunit part 2, authentic frameshift" 7 1784241..1784561 + 106 18161305 - PAE2996 - - hypothetical protein 7 1790290..1790412 - 40 18161314 - PAE3006 - - paREP2a 7 2125232..2127118 + 628 18161731 - PAE3545 - - paREP2b 8 233901..235070 + 389 18159355 - PAE0431 - - glycosyltransferase (type 1) 8 242168..243250 + 360 18159364 - PAE0440 - - glycosyltransferase (type 1) 8 297519..297857 + 112 18159434 - PAE0552 - - conserved hypothetical protein 8 1567110..1567484 + 124 18161020 - PAE2634 - - conserved hypothetical protein 9 376559..376960 - 133 18159534 - PAE0685 - - conserved protein (probable universal stress protein homolog) 9 438301..438792 + 163 18159613 - PAE0786 - - conserved protein with predicted RNA binding PUA domain 9 780617..780775 + 52 18160013 - PAE1313 - - "conserved within P. aerophilum part 2, authentic frameshift" 9 1853256..1854137 - 293 18161398 - PAE3116 - - conserved hypothetical protein 9 2113530..2114735 + 401 18161719 - PAE3526 - - hypothetical protein 10 78314..78655 + 113 18159146 - PAE0143 - - paREP5b 10 86727..87071 + 114 18159162 - PAE0165 - - conserved hypothetical protein 10 636514..637401 - 295 18159850 - PAE1082 - - conserved hypothetical protein 10 647743..648504 + 253 18159861 - PAE1102 - - hypothetical protein 10 922937..923320 - 127 18160203 - PAE1573 - - paREP2a 10 923330..924526 + 398 18160204 - PAE1574 - - paREP2b 10 927291..928340 - 349 18160209 - PAE1581 - - NADH-ubiquinone oxidoreductase subunit 10 1627423..1627692 + 89 18161098 - PAE2741 - - paREP5b 10 1790419..1790802 - 127 18161315 - PAE3007 - - paREP2a 10 1790812..1792032 + 406 18161316 - PAE3008 - - paREP2b 10 2011696..2012787 + 363 18161593 - PAE3359 - - conserved hypothetical protein 11 504334..505134 - 266 18159683 - PAE0875 - - "competence damage protein, conjectural" 11 1486810..1487106 + 98 18160911 - PAE2485 - - hypothetical protein 12 1108295..1108735 + 146 18160434 - PAE1875 - - paREP7 12 1151969..1152874 - 301 18160494 - PAE1960 - - 3-dehydroquinate dehydratase (aroD) / possible chorismate mutase (multidomain protein) 12 1674320..1675057 - 245 18161167 - PAE2832 - - short chain dehydrogenase 12 1958854..1959420 - 188 18161521 - PAE3264 - - orotate phosphoribosyltransferase (pyrE) 13 346066..346656 - 196 18159496 - PAE0644 - - hypothetical protein 13 664742..665059 + 105 18159878 - PAE1126 - - hypothetical protein 13 976823..977050 + 75 18160277 - PAE1668 - - paREP2a 13 999677..999835 + 52 18160307 - PAE1708 - - paREP2a 13 1014119..1014307 - 62 18160327 - PAE1731 - - paREP2a 13 1148269..1148673 - 134 18160488 - PAE1951 - - conserved hypothetical protein 13 2155912..2156823 - 303 18161771 - PAE3597 - - cytochrome C oxidase assembly factor 14 14898..15275 + 125 18159064 - PAE0033 - - conserved hypothetical protein 14 530729..531718 - 329 18159718 - PAE0918 - - histidinol-phosphate aminotransferase (hisC) 14 556988..557551 + 187 18159749 - PAE0952 - - conserved hypothetical protein 14 598328..598522 - 64 18159804 - PAE1019 - - hypothetical protein 14 789004..789447 + 147 18160028 - PAE1329 - - conserved hypothetical protein 14 1102654..1103301 + 215 18160426 - PAE1863 - - hypothetical protein 14 1153763..1154755 + 330 18160496 - PAE1964 - - "aspartate aminotransferase (aspC), conjectural" 15 1683715..1683900 - 61 18161179 - PAE2848 - - hypothetical protein 16 526248..526544 + 98 18159713 - PAE0910a - - hypothetical protein 16 700843..700953 - 36 18159925 - PAE1192 - - hypothetical protein 16 897242..898483 - 413 18160174 - PAE1538 - - hypothetical protein 16 1638885..1639247 + 120 18161113 - PAE2760 - - paREP11 16 1848054..1848998 + 314 18161390 - PAE3108 - - mevalonate kinase 17 512115..513434 - 439 18159695 - PAE0888 - - conserved hypothetical protein 17 593021..593575 - 184 18159795 - PAE1008 - - conserved hypothetical protein 17 644903..645397 + 164 18159858 - PAE1096 - - P. aerophilum family 79 protein 17 941716..943704 + 662 18160232 - PAE1611 - - "helicase, possible DNA repair rad25" 18 226953..227087 + 44 18159341 - PAE0412 - - hypothetical protein 18 2096639..2096833 + 64 18161692 - PAE3489 - - hypothetical protein 19 1557134..1558144 + 336 18161008 - PAE2616 - - "iron-sulfur binding reductase, degenerate" 19 1668506..1669132 - 208 18161157 - PAE2822 - - conserved within P. aerophilum 20 952600..953307 + 235 18160244 - PAE1625 - - conserved hypothetical protein 21 600520..601191 - 223 18159809 - PAE1027 - - ribose 5-phosphate isomerase 22 34945..35025 - 26 18159086 - PAE0064a - - hypothetical protein 22 35047..35190 + 47 18159087 - PAE0065 - - hypothetical protein 22 939810..939941 - 43 18160226 - PAE1605 - - paREP2b 22 1214179..1214289 - 36 18160572 - PAE2057 - - "paREP6 part 2, authentic frameshift" 22 1903036..1903455 + 139 18161459 - PAE3193a - - "possible heat shock protein, htpX homolog part 1, authentic frameshift" 22 2114757..2115638 + 293 18161720 - PAE3527 - - conserved hypothetical protein 23 1789190..1789504 + 104 18161312 - PAE3004 - - hypothetical protein 24 535423..535929 - 168 18159726 - PAE0927 - - hypothetical protein 25 66414..68069 + 551 18159128 - PAE0119 - - hypothetical protein 25 227611..227850 - 79 18159343 - PAE0415 - - hypothetical protein 25 899835..900863 + 342 18160177 - PAE1543 - - conserved hypothetical protein 25 1124285..1124956 + 223 18160459 - PAE1910 - - hypothetical protein 26 599819..600523 + 234 18159808 - PAE1026 - - hypothetical protein 26 965984..966694 - 236 18160264 - PAE1650 - - "enoyl-CoA hydratase, probable" 26 1336047..1336352 + 101 18160733 - PAE2256 - - hypothetical protein 27 406222..406458 + 78 18159570 - PAE0731 - - "transcriptional regulatory protein, conjectural" 27 1819970..1820362 - 130 18161353 - PAE3060 - - hypothetical protein 27 1820389..1820607 + 72 18161354 - PAE3062 - - hypothetical protein 28 1438593..1439729 - 378 18160857 - PAE2419 - - conserved hypothetical protein 29 904382..905488 + 368 18160184 - PAE1550 - - "transport protein, conjectural" 29 1290020..1291216 - 398 18160673 - PAE2182 - - 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) 29 1729739..1730002 - 87 18161233 - PAE2911 - - "P. aerophilum family 453, possible regulatory protein" 30 227117..227578 + 153 18159342 - PAE0413 - - hypothetical protein 30 1503233..1503409 + 58 18160933 - PAE2516 - - hypothetical protein 30 1894255..1894575 + 106 18161446 - PAE3177 - - "conserved within P. aerophilum part 2, authentic frameshift" 31 1104153..1104314 + 53 18160429 - PAE1867 - - paREP7 31 1239797..1240054 + 85 18160610 - PAE2108 - - paREP2a 32 1339624..1341180 - 518 18160739 - PAE2263 - - paREP2b 32 1434182..1437280 + 1032 18160852 - PAE2412 - - hypothetical protein 33 894675..895007 + 110 18160170 - PAE1530 - - conserved within P. aerophilum 34 2212471..2212599 - 42 18161834 - PAE3677 - - "carbonic anhydrase part 2, authentic frameshift" 35 191524..191688 + 54 18159289 - PAE0338 - - hypothetical protein 35 871783..872031 + 82 18160137 - PAE1484 - - conserved hypothetical protein 35 1078266..1078511 - 81 18160405 - PAE1829 - - hypothetical protein 36 1428177..1428503 + 108 18160843 - PAE2400 - - hypothetical protein 36 2089535..2090707 - 390 18161681 - PAE3477 - - "indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift" 37 1283807..1284349 + 180 18160667 - PAE2176 - - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA) 37 1460787..1462052 + 421 18160886 - PAE2457 - - "arsenite transport protein, conjectural" 39 124112..124504 + 130 18159203 - PAE0227 - - "conserved within P. aerophilum, authentic frameshift" 39 990607..991191 - 194 18160295 - PAE1690 - - conserved hypothetical protein 39 1789543..1790109 + 188 18161313 - PAE3005 - - hypothetical protein 40 449563..449943 - 126 18159630 - PAE0808 - - hypothetical protein 40 1064077..1064358 - 93 18160386 - PAE1807 - - conserved within P. aerophilum 40 1402253..1402981 - 242 18160810 - PAE2359 - - hypothetical protein 40 1929123..1930181 - 352 18161485 - PAE3219 - - paREP2b 40 2218762..2219067 + 101 18161841 - PAE3685 - - hypothetical protein 41 47280..47747 + 155 18159104 - PAE0087 - - hypothetical protein 41 193746..194294 + 182 18159293 - PAE0342 - - hypothetical protein 41 510998..511636 - 212 18159693 - PAE0886 - - hypothetical protein 41 1464582..1465583 - 333 18160890 - PAE2461 - - anthranilate phosphoribosyltransferase 41 1911993..1913024 + 343 18161466 - PAE3200 - - conserved protein 42 171205..171357 - 50 18159263 - PAE0304 - - hypothetical protein 42 228788..229885 + 365 18159346 - PAE0419 - - "glycosyl transferase, putative" 42 1394441..1394749 - 102 18160797 - PAE2341 - - P. aerophilum family 562 protein 42 1638507..1638869 + 120 18161112 - PAE2759 - - conserved hypothetical protein 43 850941..851225 + 94 18160106 - PAE1434 - - "P. aerophilum family 322 protein part 2, authentic frameshift" 43 1973255..1973776 - 173 18161540 - PAE3292 - - conserved hypothetical protein 44 711986..714982 + 998 18159941 - PAE1215 - - paREP2b 44 1056268..1057020 + 250 18160377 - PAE1797 - - conserved hypothetical protein 44 1128676..1129392 + 238 18160465 - PAE1917 - - pyrroline-5-carboxylate reductase 44 1252640..1255615 + 991 18160626 - PAE2129 - - paREP2b 45 181627..183009 - 460 18159279 - PAE0323 - - "iron (II) transporter (feoB-2) part 1, conjectural, authentic frameshift" 45 661748..661861 - 37 18159874 - PAE1116 - - hypothetical protein 45 882804..883133 + 109 18160154 - PAE1511 - - hypothetical protein 45 1123244..1123510 - 88 18160456 - PAE1906 - - "P. aerophilum family 322 protein part 1, authentic frameshift" 46 939963..940070 - 35 18160227 - PAE1606 - - paREP2b 46 940116..940208 + 30 18160228 - PAE1607 - - paREP2a 46 1683915..1684031 - 38 18161180 - PAE2847 - - hypothetical protein 47 302385..302807 - 140 18159439 - PAE0562 - - paREP8 47 1700963..1701262 - 99 18161200 - PAE2870 - - paREP11 49 1769921..1770952 + 343 18161288 - PAE2978 - - sua5 family protein 49 2118384..2119985 - 533 18161723 - PAE3533 - - hypothetical protein 50 77136..77405 - 89 18159142 - PAE0138 - - hypothetical protein 50 77455..77640 + 61 18159143 - PAE0139 - - hypothetical protein 50 1315733..1316011 + 92 18160709 - PAE2226 - - conserved hypothetical protein 50 1503459..1503689 + 76 18160934 - PAE2518 - - conserved hypothetical protein 51 724499..724720 - 73 18159955 - PAE1236 - - conserved within P. aerophilum 51 789498..791075 + 525 18160029 - PAE1330 - - 2-isopropylmalate synthase (leuA) 51 1553244..1553708 + 154 18161003 - PAE2606 - - hypothetical protein 52 278747..279382 - 211 18159411 - PAE0514 - - hypothetical protein 52 688944..689147 - 67 18159913 - PAE1179 - - paREP2b 52 1065212..1065295 - 27 18160388 - PAE1809a - - paREP2a 53 2220539..2221750 + 403 18161844 - PAE3688 - - hypothetical protein 54 939589..939756 - 55 18160225 - PAE1604 - - paREP2b 54 1430131..1430604 + 157 18160846 - PAE2405 - - hypothetical protein 54 1999780..2000277 - 165 18161581 - PAE3342 - - hypothetical protein 57 268243..268494 + 83 18159398 - PAE0490 - - hypothetical protein 57 887414..887839 + 141 18160161 - PAE1518 - - conserved protein with 2 CBS domains 57 1214918..1216144 - 408 18160575 - PAE2059 - - conserved hypothetical protein 57 1930221..1930394 - 57 18161486 - PAE3220 - - paREP2b 57 2028820..2029158 - 112 18161611 - PAE3387 - - "P. aerophilum family 453, possible regulatory protein part 2, authentic frameshift" 58 578758..579519 - 253 18159779 - PAE0989 - - "histidine biosynthesis protein (hisF,cyclase)" 58 1242523..1242636 - 37 18160612 - PAE2110 - - hypothetical protein 58 1242694..1242858 + 54 18160613 - PAE2111 - - paREP2a 58 2199434..2200603 - 389 18161820 - PAE3655 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 59 684300..684959 - 219 18159907 - PAE1168 - - "ABC transporter ATP-binding protein, putative" 59 1430663..1431643 + 326 18160847 - PAE2406 - - hypothetical protein 60 7499..7612 - 37 18159051 - PAE0015 - - hypothetical protein 60 1406848..1407363 + 171 18160813 - PAE2363 - - hypothetical protein 60 1545137..1545958 - 273 18160991 - PAE2594 - - "uroporphyrinogen-III synthase (hemD), conjectural" 60 1773672..1773863 + 63 18161292 - PAE2982 - - hypothetical protein 60 1924912..1925904 - 330 18161481 - PAE3215 - - conserved hypothetical protein 61 2100274..2100609 - 111 18161698 - PAE3499 - - conserved hypothetical protein 62 1023534..1023914 + 126 18160338 - PAE1749 - - conserved hypothetical protein 62 1397662..1398069 - 135 18160803 - PAE2350 - - conserved hypothetical protein 62 1505798..1505989 + 63 18160937 - PAE2521a - - hypothetical protein 63 47753..48766 - 337 18159105 - PAE0088 - - hypothetical protein 64 863204..863806 + 200 18160127 - PAE1467 - - "conserved hypothetical protein, part 2 authentic frameshift" 64 931046..931249 + 67 18160214 - PAE1585 - - "paREP10, authentic frameshift" 65 928350..929642 - 430 18160210 - PAE1582 - - NADH-ubiquinone oxidoreductase subunit 66 550213..551253 + 346 18159744 - PAE0946 - - carbamoyl-phosphate synthase small subunit 67 46970..47239 + 89 18159103 - PAE0086 - - hypothetical protein 67 1151396..1151905 + 169 18160493 - PAE1958 - - conserved within P. aerophilum 67 1886180..1887397 + 405 18161439 - PAE3167 - - hypothetical protein 67 1893887..1894225 + 112 18161445 - PAE3176 - - "conserved within P. aerophilum part 1, authentic frameshift" 68 390568..390930 - 120 18159552 - PAE0710 - - conserved hypothetical protein 68 962325..963326 - 333 18160260 - PAE1645 - - transcription initiation factor IIB (TFIIB) 68 1143009..1143791 - 260 18160481 - PAE1941 - - "chorismate mutase, conjectural" 68 2029927..2030595 - 222 18161614 - PAE3393 - - hypothetical protein 70 457293..458678 - 461 18159642 - PAE0819 - - pyruvate kinase 72 889095..889970 + 291 18160164 - PAE1522 - - hypothetical protein 72 934535..935215 - 226 18160219 - PAE1595 - - hypothetical protein 72 935287..937755 + 822 18160220 - PAE1597 - - aminopeptidase 72 994202..994486 - 94 18160299 - PAE1696 - - paREP2b 72 994558..994905 + 115 18160301 - PAE1698 - - paREP2a 73 112713..113093 - 126 18159190 - PAE0213 - - hypothetical protein 73 661906..662175 - 89 18159875 - PAE1118 - - "paREP1, authentic frameshift" 73 1316157..1316435 - 92 18160710 - PAE2229 - - paREP2a 73 1316508..1317998 + 496 18160711 - PAE2230 - - paREP2b 75 734235..734879 + 214 18159970 - PAE1263 - - "molybdopterin oxidoreductase, iron-sulfur binding subunit" 75 1840707..1841369 - 220 18161378 - PAE3092 - - "DNA-(apurinic or apyrimidinic site) lyase, conjectural" 75 2087000..2087665 + 221 18161677 - PAE3472 - - ribosomal protein S3 78 252540..252743 + 67 18159373 - PAE0458 - - hypothetical protein 78 1962668..1962988 - 106 18161525 - PAE3271 - - DNA-directed RNA polymerase subunit 79 231720..231935 + 71 18159350 - PAE0424a - - hypothetical protein 79 1947673..1948401 + 242 18161509 - PAE3251 - - hypothetical protein 80 74251..74508 + 85 18159136 - PAE0131 - - hypothetical protein 80 636089..636517 + 142 18159849 - PAE1081 - - P. aerophilum family 70 protein 80 1731685..1731846 + 53 18161237 - PAE2916 - - hypothetical protein 81 167482..167952 - 156 18159258 - PAE0298 - - paREP2a 81 168033..169259 + 408 18159259 - PAE0299 - - paREP2b 81 1796296..1796508 - 70 18161322 - PAE3016 - - hypothetical protein 81 1969958..1970380 + 140 18161534 - PAE3284 - - conserved hypothetical protein 83 571923..572147 + 74 18159772 - PAE0979 - - hypothetical protein 83 689199..692819 - 1206 18159914 - PAE1180 - - paREP2b 83 692902..693822 + 306 18159916 - PAE1181 - - paREP2a 84 1542038..1543165 - 375 18160986 - PAE2587 - - "cobyrinic acid a,c-diamide synthase (cbiA) part 2, authentic frameshift" 84 2117092..2118300 - 402 18161722 - PAE3532 - - hypothetical protein 85 29077..30612 + 511 18159082 - PAE0061 - - "extracellular solute binding protein, conjectural" 86 524593..524664 + 23 18159710 - PAE0908a - - hypothetical protein 88 908727..909746 - 339 18160188 - PAE1555 - - dolichol-phosphate mannosyltransferase 88 909834..910859 + 341 18160190 - PAE1557 - - "P. aerophilum family 417, putative ATP binding" 88 1367941..1369026 + 361 18160768 - PAE2301 - - "ABC transporter ATP-binding component, degenerate" 90 1669151..1669354 - 67 18161158 - PAE2823 - - hypothetical protein 91 882559..882759 + 66 18160153 - PAE1509 - - hypothetical protein 92 929707..929976 - 89 18160211 - PAE1583 - - paREP2a 92 2103787..2103987 + 66 18161705 - PAE3506 - - hypothetical protein 93 940301..940609 + 102 18160230 - PAE1608 - - paREP2a 94 72118..73725 + 535 18159134 - PAE0128 - - conserved hypothetical protein 94 140551..140814 + 87 18159220 - PAE0253 - - "P. aerophilum family 562 protein, associated with P. aerophilum family 577, degenerate" 94 1173680..1174552 + 290 18160521 - PAE1995 - - 3-isopropylmalate dehydrogenase (leuB) 94 1814958..1815947 - 329 18161348 - PAE3051 - - hypothetical protein 95 1679360..1681447 - 695 18161173 - PAE2840 - - "molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift" 96 697721..697951 - 76 18159922 - PAE1188 - - hypothetical protein 96 1571185..1571745 - 186 18161025 - PAE2641 - - hypothetical protein 97 1862107..1863570 - 487 18161407 - PAE3127 - - "P. aerophilum family 68 protein, part 2, authentic frameshift" 98 976417..976587 - 56 18160275 - PAE1665 - - paREP2b 98 976685..976810 + 41 18160276 - PAE1667 - - paREP2a 100 385708..385875 + 55 18159545 - PAE0700 - - hypothetical protein 100 1047613..1048119 - 168 18160366 - PAE1782 - - ribosomal protein L22 101 1136146..1136949 - 267 18160473 - PAE1929 - - transketolase (N terminal section) 103 524767..525168 + 133 18159711 - PAE0909 - - conserved within P. aerophilum 103 1163002..1163280 + 92 18160508 - PAE1978 - - DNA-directed RNA polymerase subunit L (rpoL) 103 1645709..1646029 + 106 18161122 - PAE2777 - - hypothetical protein 104 1313819..1313938 - 39 18160705 - PAE2222a - - hypothetical protein 105 515091..516035 + 314 18159699 - PAE0893 - - chorismate mutase/prephenate dehydratase (P-protein) 105 800977..801540 + 187 18160041 - PAE1347 - - conserved within P. aerophilum 105 1535352..1536011 - 219 18160976 - PAE2573 - - uroporphyrin-III C-methyltransferase 105 1827370..1827465 - 31 18161362 - PAE3075 - - paREP2b 106 1081006..1081740 - 244 18160410 - PAE1837 - - conserved hypothetical protein 108 228549..228746 + 65 18159345 - PAE0418 - - hypothetical protein 109 538086..539666 - 526 18159730 - PAE0931 - - hypothetical protein 109 2121046..2121861 - 271 18161725 - PAE3538 - - hypothetical protein 110 948996..949355 - 119 18160238 - PAE1618 - - paREP2a 110 949465..950037 + 190 18160239 - PAE1619 - - paREP2b 111 205731..205877 + 48 18159307 - PAE0364 - - paREP2a 111 1231206..1231751 + 181 18160595 - PAE2085 - - "peroxiredoxin, probable" 111 2031561..2033282 - 573 18161617 - PAE3399 - - conserved within P. aerophilum 112 184519..185967 - 482 18159282 - PAE0329 - - conserved hypothetical protein 112 199877..200164 - 95 18159300 - PAE0351 - - hypothetical protein 113 1360556..1360687 + 43 18160761 - PAE2294 - - hypothetical protein 114 1147898..1148155 - 85 18160486 - PAE1949 - - paREP11 116 1802425..1803375 - 316 18161329 - PAE3027 - - conserved hypothetical protein 118 260079..260423 + 114 18159385 - PAE0473 - - hypothetical protein 118 1073733..1073909 - 58 18160398 - PAE1823 - - "conserved within P. aerophilum part 2, authentic frameshift" 119 173878..174126 - 82 18159269 - PAE0312 - - conserved within P. aerophilum 121 93587..94363 + 258 18159173 - PAE0180 - - P. aerophilum family 577 protein 122 251058..252212 - 384 18159371 - PAE0455 - - "conserved within P. aerophilum, degenerate" 122 1127679..1128632 + 317 18160464 - PAE1916 - - hypothetical protein 123 38499..39287 + 262 18159092 - PAE0070 - - hypothetical protein 123 276685..277419 - 244 18159409 - PAE0512 - - hypothetical protein 123 702031..702585 - 184 18159928 - PAE1197 - - hypothetical protein 125 1239626..1239766 + 46 18160609 - PAE2106 - - paREP2a 125 1635846..1636031 + 61 18161110 - PAE2756 - - "conserved within P. aerophilum, degenerate" 128 969597..972524 - 975 18160268 - PAE1656 - - paREP2b 129 699818..700714 - 298 18159924 - PAE1191 - - paREP2b 130 1527584..1528414 - 276 18160964 - PAE2560 - - hypothetical protein 131 1321837..1322787 - 316 18160717 - PAE2238 - - conserved protein (possible primase) 131 1446972..1447133 - 53 18160864 - PAE2427 - - hypothetical protein 133 638148..638492 - 114 18159852 - PAE1086 - - hypothetical protein 133 1108868..1109605 + 245 18160435 - PAE1876 - - conserved within P. aerophilum 134 954039..954791 + 250 18160246 - PAE1627 - - hypothetical protein 135 124738..124851 - 37 18159204 - PAE0228 - - hypothetical protein 135 1897231..1897344 - 37 18161451 - PAE3183 - - hypothetical protein 136 271587..271790 + 67 18159403 - PAE0499 - - hypothetical protein 137 1485788..1485991 + 67 18160908 - PAE2481a - - hypothetical protein 138 113166..113483 - 105 18159191 - PAE0214 - - hypothetical protein 138 286156..286281 + 41 18159421 - PAE0538 - - conserved within P. aerophilum 138 1644153..1644632 - 159 18161120 - PAE2773 - - conserved hypothetical protein 139 885579..886106 - 175 18160157 - PAE1514 - - paREP2b 140 1017035..1018066 - 343 18160331 - PAE1736 - - beta-glucosidase 141 259081..259293 - 70 18159381 - PAE0468 - - hypothetical protein 142 1885991..1886113 + 40 18161438 - PAE3166 - - paREP2a 146 979203..981128 - 641 18160280 - PAE1671 - - paREP2b 146 981274..981384 + 36 18160281 - PAE1672 - - paREP2a 146 1261160..1261300 + 46 18160634 - PAE2136 - - paREP2a 146 1496570..1497208 - 212 18160923 - PAE2503 - - "conserved hypothetical protein, frameshift" 146 2062651..2063100 - 149 18161650 - PAE3441 - - "conserved hypothetical protein part 1, authentic frameshift" 147 7672..7767 - 31 18159052 - PAE0016 - - hypothetical protein 147 7914..8318 + 134 18159053 - PAE0017 - - conserved hypothetical protein 147 532338..533753 - 471 18159720 - PAE0922 - - conserved hypothetical protein 147 852149..852436 + 95 18160109 - PAE1437 - - hypothetical protein 147 860907..861059 - 50 18160120 - PAE1454 - - paREP2a 149 1172492..1173586 + 364 18160520 - PAE1993 - - 2-isopropylmalate synthase (leuA) with possible unusual start codon 150 449983..450402 - 139 18159631 - PAE0809 - - hypothetical protein 150 725307..726110 + 267 18159958 - PAE1240 - - ribosomal protein S6 modification protein (rimK) 151 1940801..1940983 - 60 18161498 - PAE3239 - - hypothetical protein 152 284869..285303 - 144 18159418 - PAE0534 - - "P. aerophilum family 1964 protein, degenerate" 152 703671..703901 - 76 18159931 - PAE1200 - - hypothetical protein 152 704053..704322 + 89 18159932 - PAE1201 - - paREP2a 152 861756..862166 - 136 18160123 - PAE1461 - - hypothetical protein 153 487416..487568 + 50 18159666 - PAE0845 - - paREP2a 154 1196417..1196824 - 135 18160551 - PAE2032 - - paREP11 155 1168139..1169476 - 445 18160515 - PAE1986 - - 2-isopropylmalate synthase (leuA) with possible unusual start codon 157 86646..86717 + 23 18159161 - PAE0164a - - hypothetical protein 158 261049..261144 - 31 18159387 - PAE0476 - - hypothetical protein 158 710379..710756 - 125 18159939 - PAE1213 - - paREP2a 158 1251033..1251410 - 125 18160624 - PAE2127 - - paREP2a 158 1994267..1994467 - 66 18161569 - PAE3330 - - hypothetical protein 161 838426..838998 + 190 18160086 - PAE1404 - - hypothetical protein 161 1034986..1035363 - 125 18160352 - PAE1768 - - paREP2a 161 1068564..1070129 + 521 18160394 - PAE1816 - - hypothetical protein 164 849549..849719 - 56 18160103 - PAE1430 - - conserved within P. aerophilum 168 630955..633108 + 717 18159846 - PAE1077 - - P. aerophilum family 66 protein 170 730871..731941 + 356 18159966 - PAE1252 - - conserved hypothetical protein 173 1942935..1943744 + 269 18161502 - PAE3244 - - "chromosome partitioning ATPase, parA family protein, conjectural" 180 598946..599557 + 203 18159806 - PAE1022 - - "thiamine-monophosphate kinase part 2, authentic frameshift" 180 1907253..1911080 - 1275 18161463 - PAE3198 - - "ATP-dependant helicase, probable" 180 2070160..2070462 - 100 18161656 - PAE3450 - - hypothetical protein 181 1077809..1078321 + 170 18160404 - PAE1828 - - paREP13 182 225611..225922 + 103 18159337 - PAE0407 - - paREP8 182 982330..982563 - 77 18160283 - PAE1674 - - hypothetical protein 182 1828771..1828959 + 62 18161364 - PAE3077 - - hypothetical protein 183 1451349..1451696 - 115 18160872 - PAE2439 - - conserved within P. aerophilum 185 844477..844605 - 42 18160096 - PAE1420 - - hypothetical protein 185 1348265..1350649 + 794 18160751 - PAE2280 - - conserved hypothetical protein 186 2128919..2129365 - 148 18161735 - PAE3550 - - hypothetical protein 187 1499696..1499908 + 70 18160928 - PAE2509 - - paREP7 187 1541596..1541847 + 83 18160985 - PAE2584 - - paREP1 187 1659753..1659827 + 24 18161145 - PAE2804a - - "paREP8, degenerate" 190 945687..945854 - 55 18160236 - PAE1616 - - hypothetical protein 190 946044..948989 + 981 18160237 - PAE1617 - - isoleucyl-tRNA synthetase 195 1109800..1110477 + 225 18160436 - PAE1878 - - "ATP binding protein, degenerate" 196 619442..620182 - 246 18159832 - PAE1056 - - thiF/moeB/hesA family protein 196 715015..715653 - 212 18159942 - PAE1216 - - ribonuclease HII (rnhB) 199 1065347..1065442 - 31 18160389 - PAE1810 - - paREP2a 200 1030363..1031967 - 534 18160346 - PAE1762 - - "iron-sulfur binding reductase, probable" 204 1640019..1640171 + 50 18161116 - PAE2766 - - hypothetical protein 206 985368..985931 + 187 18160290 - PAE1683 - - hypothetical protein 206 1191710..1192045 - 111 18160546 - PAE2027 - - "paREP10, authentic frameshift" 208 127002..127232 + 76 18159207 - PAE0235 - - hypothetical protein 209 1332872..1334065 + 397 18160729 - PAE2251 - - "aspartate aminotransferase (aspC), conjectural" 210 1583072..1586575 - 1167 18161040 - PAE2662 - - formate dehydrogenase alpha subunit 213 39500..39829 + 109 18159093 - PAE0073 - - hypothetical protein 215 843676..844065 + 129 18160094 - PAE1418 - - hypothetical protein 216 171399..171551 - 50 18159264 - PAE0305 - - conserved hypothetical protein 218 439982..440584 + 200 18159617 - PAE0791 - - conserved hypothetical protein 221 2120034..2120825 - 263 18161724 - PAE3535 - - hypothetical protein 222 225966..226175 - 69 18159338 - PAE0409 - - hypothetical protein 222 226397..226648 + 83 18159339 - PAE0410 - - hypothetical protein 223 847981..848883 + 300 18160101 - PAE1427 - - arsenical pump-driving ATPase 225 914689..914994 - 101 18160196 - PAE1563 - - paREP2a 228 169487..169972 + 161 18159260 - PAE0301 - - hypothetical protein 228 1684788..1685369 - 193 18161183 - PAE2853 - - paREP6 228 1685597..1686577 + 326 18161184 - PAE2855 - - P. aerophilum family 1964 protein 228 2163904..2164227 - 107 18161779 - PAE3605 - - conserved within P. aerophilum 234 138129..138272 - 47 18159216 - PAE0247 - - hypothetical protein 235 1697172..1699184 - 670 18161197 - PAE2867 - - acetyl-coenzyme A synthetase 237 1826870..1827133 - 87 18161361 - PAE3072 - - paREP2b 240 142112..143281 - 389 18159223 - PAE0257 - - "tryptophan synthase beta subunit (trpB), authentic frameshift" 241 842580..842750 - 56 18160091 - PAE1413 - - "paREP6, authentic frameshift" 241 1314042..1314128 - 28 18160706 - PAE2222b - - hypothetical protein 242 2183638..2183760 + 40 18161800 - PAE3628 - - conserved within P. aerophilum 243 1471..2397 - 308 18159043 - PAE0005 - - "peptidase, putative" 243 741680..742891 + 403 18159976 - PAE1269 - - conserved hypothetical protein 244 1708785..1709735 + 316 18161212 - PAE2884 - - argininosuccinate synthase (argG) 248 213289..213894 + 201 18159316 - PAE0374 - - conserved hypothetical protein 255 1266345..1266539 - 64 18160643 - PAE2148 - - hypothetical protein 255 1660082..1660699 + 205 18161147 - PAE2806 - - conserved hypothetical protein 256 572963..574408 + 481 18159774 - PAE0983 - - conserved hypothetical protein 256 1264390..1264566 + 58 18160639 - PAE2142 - - hypothetical protein 257 1519215..1519691 + 158 18160953 - PAE2546 - - paREP11 268 543795..544376 + 193 18159735 - PAE0937 - - hypothetical protein 270 183602..184522 + 306 18159281 - PAE0328 - - thiamine transport ATP-binding protein 271 1264883..1265122 - 79 18160640 - PAE2144 - - conserved within P. aerophilum 271 2197261..2198082 + 273 18161818 - PAE3650 - - conserved protein 272 896383..896970 - 195 18160173 - PAE1536 - - conserved protein (possible dual specificity phosphatase) 275 1682588..1682845 - 85 18161176 - PAE2844 - - hypothetical protein 282 2046236..2046379 - 47 18161632 - PAE3419 - - paREP2b 283 71097..71363 + 88 18159132 - PAE0124 - - hypothetical protein 287 1103588..1103932 + 114 18160427 - PAE1864 - - paREP7 291 581287..581724 + 145 18159784 - PAE0993 - - conserved within P. aerophilum 295 129407..133126 + 1239 18159211 - PAE0242 - - hypothetical protein 296 849158..849253 - 31 18160102 - PAE1429 - - hypothetical protein 301 219219..219353 - 44 18159325 - PAE0390 - - "paREP1, degenerate" 301 219654..219962 + 102 18159326 - PAE0391a - - "conserved protein, degenerate" 302 1376017..1377216 + 399 18160777 - PAE2315 - - "aminotransferase, class I" 311 804233..804709 + 158 18160046 - PAE1355 - - cytochrome C oxidase subunit II 312 1701309..1701536 - 75 18161201 - PAE2872 - - conserved within P. aerophilum 312 1701848..1702129 + 93 18161202 - PAE2874 - - hypothetical protein 316 2108947..2109192 - 81 18161712 - PAE3516 - - hypothetical protein 317 241225..242160 + 311 18159363 - PAE0439 - - dolichol-phosphate mannosyltransferase 322 1327074..1327646 - 190 18160723 - PAE2244 - - hypothetical protein 324 2122854..2123009 - 51 18161727 - PAE3541 - - hypothetical protein 324 2123333..2123773 + 146 18161729 - PAE3542 - - hypothetical protein 328 1788559..1788708 + 49 18161310 - PAE3002 - - paREP2a 331 571256..571609 + 117 18159770 - PAE0976 - - hypothetical protein 333 276135..276323 + 62 18159408 - PAE0510 - - hypothetical protein 343 322879..322956 - 25 18159465 - PAE0602a - - hypothetical protein 345 232901..233893 + 330 18159354 - PAE0430 - - glycosyltransferase (type 1) 348 2159730..2160857 - 375 18161776 - PAE3602 - - conserved hypothetical protein 349 1238587..1238937 + 116 18160607 - PAE2104 - - hypothetical protein 355 1009425..1009997 + 190 18160321 - PAE1723 - - "conserved within P. aerophilum, authentic frameshift" 358 2124131..2125225 + 364 18161730 - PAE3544 - - paREP2b 366 1046951..1047247 - 98 18160365 - PAE1780a - - "conserved protein part 1, authentic frameshift" 367 1154773..1154850 - 25 18160497 - PAE1966a - - hypothetical protein 368 244436..245560 + 374 18159367 - PAE0442 - - glycosyltransferase (type 1) 368 1309784..1311367 + 527 18160701 - PAE2217 - - DNA topoisomerase VI (type II ) subunit b 382 1496567..1496764 + 65 18160922 - PAE2500 - - paREP13 391 264309..264434 - 41 18159390 - PAE0479 - - hypothetical protein 399 521829..522077 + 82 18159705 - PAE0903 - - hypothetical protein 401 1112828..1113727 - 299 18160440 - PAE1884 - - "phosphate permease, conjectural" 409 732350..732874 + 174 18159967 - PAE1257 - - "conserved hypothetical protein, degenerate" 414 165416..165508 - 30 18159253 - PAE0294a - - hypothetical protein 414 165922..166062 + 46 18159254 - PAE0294b - - hypothetical protein 417 454218..455327 + 369 18159638 - PAE0815 - - "serine/threonine protein kinase, putative" 418 25140..25364 - 74 18159078 - PAE0051 - - hypothetical protein 422 76373..76714 - 113 18159141 - PAE0137 - - hypothetical protein 424 2050011..2050607 + 198 18161636 - PAE3424 - - "conserved hypothetical protein, degenerate" 426 84327..84497 - 56 18159157 - PAE0160 - - hypothetical protein 428 786815..786934 - 39 18160023 - PAE1325 - - hypothetical protein 428 787362..787487 + 41 18160025 - PAE1326 - - hypothetical protein 432 1634659..1634985 + 108 18161107 - PAE2753 - - hypothetical protein 435 81485..81628 + 47 18159150 - PAE0150 - - hypothetical protein 435 1004477..1004593 - 38 18160315 - PAE1717a - - hypothetical protein 435 1005028..1007094 + 688 18160317 - PAE1718 - - P. aerophilum family 66 protein 450 301759..301935 - 58 18159438 - PAE0559 - - hypothetical protein 463 1913015..1914406 - 463 18161467 - PAE3201 - - C-5 cytosine-specific DNA methylase 467 2151986..2152405 - 139 18161767 - PAE3588 - - conserved protein with 2 CBS domains 467 2152872..2153642 + 256 18161768 - PAE3592 - - "acetyl-coenzyme A synthetase, degenerate" 468 1706071..1706451 + 126 18161208 - PAE2879 - - hypothetical protein 469 175597..176487 + 296 18159272 - PAE0315 - - ABC-2 type transport system ATP-binding protein 479 1486470..1486799 + 109 18160910 - PAE2483 - - hypothetical protein 483 518173..518388 - 71 18159701 - PAE0894a - - hypothetical protein 485 1522164..1522898 + 244 18160959 - PAE2552 - - conserved hypothetical protein 508 1076402..1077628 + 408 18160403 - PAE1827 - - paREP12 533 867201..868841 - 546 18160132 - PAE1478 - - hypothetical protein 536 2101487..2101543 - 18 18161700 - PAE3501a - - hypothetical protein 540 267069..267302 + 77 18159396 - PAE0487 - - hypothetical protein 547 1283354..1283770 + 138 18160666 - PAE2175 - - hypothetical protein 554 146662..147021 + 119 18159229 - PAE0265 - - hypothetical protein 559 1218466..1218582 - 38 18160579 - PAE2066 - - paREP2b 585 127222..127434 - 70 18159208 - PAE0237 - - hypothetical protein 594 1615483..1617084 - 533 18161085 - PAE2724 - - "P. aerophilum family 66 protein, interruption-C" 598 1282069..1282431 + 120 18160664 - PAE2171 - - "paREP2b, degenerate" 602 1301881..1302198 - 105 18160689 - PAE2202 - - ribosomal protein L37 634 1263016..1263324 - 102 18160637 - PAE2138a - - hypothetical protein 634 1263958..1264134 + 58 18160638 - PAE2140 - - hypothetical protein 643 622637..623998 + 453 18159835 - PAE1064 - - "sulfonate transport permease protein, putative" 643 1090039..1090698 + 219 18160419 - PAE1850 - - "rRNA intron-encoded homing endonuclease, possible" 652 621719..621994 + 91 18159834 - PAE1060 - - partial recF homolog 711 300890..301762 + 290 18159437 - PAE0558 - - conserved within P. aerophilum 713 1643440..1643712 + 90 18161119 - PAE2770 - - "paREP12, degenerate" 743 265267..265407 - 46 18159393 - PAE0482 - - hypothetical protein 780 1494605..1495516 + 303 18160919 - PAE2498 - - hypothetical protein 817 255103..255459 + 118 18159376 - PAE0462 - - hypothetical protein 826 2185741..2186796 - 351 18161803 - PAE3632 - - hypothetical protein 837 1870244..1870837 - 197 18161418 - PAE3141 - - hypothetical protein 914 275620..275802 + 60 18159407 - PAE0507 - - hypothetical protein 944 604504..605109 + 201 18159813 - PAE1031 - - conserved within P. aerophilum 945 160952..161050 - 32 18159246 - PAE0286 - - paREP2b 988 380353..380580 - 75 18159538 - PAE0692 - - hypothetical protein with partial (eukaryotic) protein kinase domain 1535 273325..273663 + 112 18159404 - PAE0505 - - conserved within P. aerophilum 5876 94405..95193 - 262 18159174 - PAE0181 - - conserved hypothetical protein