Pyrobaculum aerophilum Cluster B distant genes 431 proteins distance Location Strand Length PID Gene Synonym Code COG Product -103 1103829..1104122 + 97 18160428 - PAE1865 - - paREP7 -88 1903367..1903951 + 194 18161460 - PAE3195 - - "possible heat shock protein, htpX homolog part 2, authentic frameshift" -72 1481421..1482269 - 282 18160905 - PAE2479 - - enoyl-CoA hydratase -70 1282361..1282807 + 148 18160665 - PAE2173 - - "paREP2b, degenerate" -70 2083838..2084974 + 378 18161672 - PAE3467 - - hypothetical protein -69 1417333..1418064 - 243 18160829 - PAE2385 - - "transport protein part 2, authentic frameshift" -67 23237..24241 - 334 18159075 - PAE0049 - - serine protease inhibitor (serpin) -61 1695105..1695548 - 147 18161195 - PAE2866a - - conserved protein with CBS domains -61 2093922..2094782 + 286 18161689 - PAE3486 - - conserved hypothetical protein -55 214660..215607 + 315 18159318 - PAE0377 - - "cobC aminotransferase, conjectural" -49 628341..628934 - 197 18159842 - PAE1073 - - hypothetical protein -48 1046196..1046999 - 267 18160364 - PAE1780 - - "conserved protein part 2, authentic frameshift" -46 999789..1000067 + 92 18160308 - PAE1709 - - paREP2a -45 1608051..1608278 - 75 18161072 - PAE2705 - - hypothetical protein -43 15265..16158 - 297 18159065 - PAE0034 - - homoserine kinase -40 794139..794672 - 177 18160033 - PAE1334 - - possible respiratory chain protein -40 1413622..1414773 - 383 18160823 - PAE2376 - - "drug resistance protein, conjectural" -39 623959..624723 + 254 18159836 - PAE1066 - - "taurine(sulfate) transport ATP-binding protein, putative" -34 1321101..1321871 - 256 18160716 - PAE2237 - - conserved hypothetical protein -33 1608885..1609151 - 88 18161075 - PAE2708 - - hypothetical protein -31 1072651..1073472 + 273 18160397 - PAE1820 - - hypothetical protein -31 1117002..1117406 - 134 18160445 - PAE1893 - - conserved hypothetical protein -30 87429..87824 - 131 18159164 - PAE0167 - - hypothetical protein -30 574389..574946 - 185 18159775 - PAE0984 - - P. aerophilum family 70 protein -30 1458059..1458445 - 128 18160881 - PAE2452 - - paREP13 -30 1649015..1649386 + 123 18161128 - PAE2784 - - conserved hypothetical protein -30 1861604..1862137 - 177 18161406 - PAE3125 - - P. aerophilum family 70 protein -28 156806..157387 - 193 18159242 - PAE0280 - - "P. aerophilum family 70 protein," -28 1099235..1100269 + 344 18160422 - PAE1858 - - conserved within P. aerophilum -28 1133000..1134202 - 400 18160470 - PAE1924 - - 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) -28 1226885..1227628 - 247 18160591 - PAE2081 - - branched-chain amino acid transport ATP-binding protein -28 1247580..1248611 - 343 18160619 - PAE2119 - - "conjugal transfer protein, conjectural" -28 1511454..1512047 + 197 18160945 - PAE2534 - - hypothetical protein -28 1795152..1795427 - 91 18161320 - PAE3014 - - conserved within P. aerophilum -28 1823344..1824105 - 253 18161358 - PAE3065 - - "ABC-2 type transport system, membrane protein" -28 1850001..1850237 + 78 18161393 - PAE3112 - - hypothetical protein -27 780366..780608 + 80 18160012 - PAE1311 - - "conserved within P. aerophilum part 1, authentic frameshift" -27 1034650..1034772 - 40 18160350 - PAE1765a - - paREP2a -27 2159149..2159733 + 194 18161775 - PAE3601 - - uroporphyrin-III C-methyltransferase 26 599819..600523 + 234 18159808 - PAE1026 - - hypothetical protein 26 965984..966694 - 236 18160264 - PAE1650 - - "enoyl-CoA hydratase, probable" 26 1336047..1336352 + 101 18160733 - PAE2256 - - hypothetical protein 27 406222..406458 + 78 18159570 - PAE0731 - - "transcriptional regulatory protein, conjectural" 27 1819970..1820362 - 130 18161353 - PAE3060 - - hypothetical protein 27 1820389..1820607 + 72 18161354 - PAE3062 - - hypothetical protein 28 1438593..1439729 - 378 18160857 - PAE2419 - - conserved hypothetical protein 29 904382..905488 + 368 18160184 - PAE1550 - - "transport protein, conjectural" 29 1290020..1291216 - 398 18160673 - PAE2182 - - 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) 29 1729739..1730002 - 87 18161233 - PAE2911 - - "P. aerophilum family 453, possible regulatory protein" 30 227117..227578 + 153 18159342 - PAE0413 - - hypothetical protein 30 1503233..1503409 + 58 18160933 - PAE2516 - - hypothetical protein 30 1894255..1894575 + 106 18161446 - PAE3177 - - "conserved within P. aerophilum part 2, authentic frameshift" 31 1104153..1104314 + 53 18160429 - PAE1867 - - paREP7 31 1239797..1240054 + 85 18160610 - PAE2108 - - paREP2a 32 1339624..1341180 - 518 18160739 - PAE2263 - - paREP2b 32 1434182..1437280 + 1032 18160852 - PAE2412 - - hypothetical protein 33 894675..895007 + 110 18160170 - PAE1530 - - conserved within P. aerophilum 34 2212471..2212599 - 42 18161834 - PAE3677 - - "carbonic anhydrase part 2, authentic frameshift" 35 191524..191688 + 54 18159289 - PAE0338 - - hypothetical protein 35 871783..872031 + 82 18160137 - PAE1484 - - conserved hypothetical protein 35 1078266..1078511 - 81 18160405 - PAE1829 - - hypothetical protein 36 1428177..1428503 + 108 18160843 - PAE2400 - - hypothetical protein 36 2089535..2090707 - 390 18161681 - PAE3477 - - "indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift" 37 1283807..1284349 + 180 18160667 - PAE2176 - - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA) 37 1460787..1462052 + 421 18160886 - PAE2457 - - "arsenite transport protein, conjectural" 39 124112..124504 + 130 18159203 - PAE0227 - - "conserved within P. aerophilum, authentic frameshift" 39 990607..991191 - 194 18160295 - PAE1690 - - conserved hypothetical protein 39 1789543..1790109 + 188 18161313 - PAE3005 - - hypothetical protein 40 449563..449943 - 126 18159630 - PAE0808 - - hypothetical protein 40 1064077..1064358 - 93 18160386 - PAE1807 - - conserved within P. aerophilum 40 1402253..1402981 - 242 18160810 - PAE2359 - - hypothetical protein 40 1929123..1930181 - 352 18161485 - PAE3219 - - paREP2b 40 2218762..2219067 + 101 18161841 - PAE3685 - - hypothetical protein 41 47280..47747 + 155 18159104 - PAE0087 - - hypothetical protein 41 193746..194294 + 182 18159293 - PAE0342 - - hypothetical protein 41 510998..511636 - 212 18159693 - PAE0886 - - hypothetical protein 41 1464582..1465583 - 333 18160890 - PAE2461 - - anthranilate phosphoribosyltransferase 41 1911993..1913024 + 343 18161466 - PAE3200 - - conserved protein 42 171205..171357 - 50 18159263 - PAE0304 - - hypothetical protein 42 228788..229885 + 365 18159346 - PAE0419 - - "glycosyl transferase, putative" 42 1394441..1394749 - 102 18160797 - PAE2341 - - P. aerophilum family 562 protein 42 1638507..1638869 + 120 18161112 - PAE2759 - - conserved hypothetical protein 43 850941..851225 + 94 18160106 - PAE1434 - - "P. aerophilum family 322 protein part 2, authentic frameshift" 43 1973255..1973776 - 173 18161540 - PAE3292 - - conserved hypothetical protein 44 711986..714982 + 998 18159941 - PAE1215 - - paREP2b 44 1056268..1057020 + 250 18160377 - PAE1797 - - conserved hypothetical protein 44 1128676..1129392 + 238 18160465 - PAE1917 - - pyrroline-5-carboxylate reductase 44 1252640..1255615 + 991 18160626 - PAE2129 - - paREP2b 45 181627..183009 - 460 18159279 - PAE0323 - - "iron (II) transporter (feoB-2) part 1, conjectural, authentic frameshift" 45 661748..661861 - 37 18159874 - PAE1116 - - hypothetical protein 45 882804..883133 + 109 18160154 - PAE1511 - - hypothetical protein 45 1123244..1123510 - 88 18160456 - PAE1906 - - "P. aerophilum family 322 protein part 1, authentic frameshift" 46 939963..940070 - 35 18160227 - PAE1606 - - paREP2b 46 940116..940208 + 30 18160228 - PAE1607 - - paREP2a 46 1683915..1684031 - 38 18161180 - PAE2847 - - hypothetical protein 47 302385..302807 - 140 18159439 - PAE0562 - - paREP8 47 1700963..1701262 - 99 18161200 - PAE2870 - - paREP11 49 1769921..1770952 + 343 18161288 - PAE2978 - - sua5 family protein 49 2118384..2119985 - 533 18161723 - PAE3533 - - hypothetical protein 50 77136..77405 - 89 18159142 - PAE0138 - - hypothetical protein 50 77455..77640 + 61 18159143 - PAE0139 - - hypothetical protein 50 1315733..1316011 + 92 18160709 - PAE2226 - - conserved hypothetical protein 50 1503459..1503689 + 76 18160934 - PAE2518 - - conserved hypothetical protein 51 724499..724720 - 73 18159955 - PAE1236 - - conserved within P. aerophilum 51 789498..791075 + 525 18160029 - PAE1330 - - 2-isopropylmalate synthase (leuA) 51 1553244..1553708 + 154 18161003 - PAE2606 - - hypothetical protein 52 278747..279382 - 211 18159411 - PAE0514 - - hypothetical protein 52 688944..689147 - 67 18159913 - PAE1179 - - paREP2b 52 1065212..1065295 - 27 18160388 - PAE1809a - - paREP2a 53 2220539..2221750 + 403 18161844 - PAE3688 - - hypothetical protein 54 939589..939756 - 55 18160225 - PAE1604 - - paREP2b 54 1430131..1430604 + 157 18160846 - PAE2405 - - hypothetical protein 54 1999780..2000277 - 165 18161581 - PAE3342 - - hypothetical protein 57 268243..268494 + 83 18159398 - PAE0490 - - hypothetical protein 57 887414..887839 + 141 18160161 - PAE1518 - - conserved protein with 2 CBS domains 57 1214918..1216144 - 408 18160575 - PAE2059 - - conserved hypothetical protein 57 1930221..1930394 - 57 18161486 - PAE3220 - - paREP2b 57 2028820..2029158 - 112 18161611 - PAE3387 - - "P. aerophilum family 453, possible regulatory protein part 2, authentic frameshift" 58 578758..579519 - 253 18159779 - PAE0989 - - "histidine biosynthesis protein (hisF,cyclase)" 58 1242523..1242636 - 37 18160612 - PAE2110 - - hypothetical protein 58 1242694..1242858 + 54 18160613 - PAE2111 - - paREP2a 58 2199434..2200603 - 389 18161820 - PAE3655 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 59 684300..684959 - 219 18159907 - PAE1168 - - "ABC transporter ATP-binding protein, putative" 59 1430663..1431643 + 326 18160847 - PAE2406 - - hypothetical protein 60 7499..7612 - 37 18159051 - PAE0015 - - hypothetical protein 60 1406848..1407363 + 171 18160813 - PAE2363 - - hypothetical protein 60 1545137..1545958 - 273 18160991 - PAE2594 - - "uroporphyrinogen-III synthase (hemD), conjectural" 60 1773672..1773863 + 63 18161292 - PAE2982 - - hypothetical protein 60 1924912..1925904 - 330 18161481 - PAE3215 - - conserved hypothetical protein 61 2100274..2100609 - 111 18161698 - PAE3499 - - conserved hypothetical protein 62 1023534..1023914 + 126 18160338 - PAE1749 - - conserved hypothetical protein 62 1397662..1398069 - 135 18160803 - PAE2350 - - conserved hypothetical protein 62 1505798..1505989 + 63 18160937 - PAE2521a - - hypothetical protein 63 47753..48766 - 337 18159105 - PAE0088 - - hypothetical protein 64 863204..863806 + 200 18160127 - PAE1467 - - "conserved hypothetical protein, part 2 authentic frameshift" 64 931046..931249 + 67 18160214 - PAE1585 - - "paREP10, authentic frameshift" 65 928350..929642 - 430 18160210 - PAE1582 - - NADH-ubiquinone oxidoreductase subunit 66 550213..551253 + 346 18159744 - PAE0946 - - carbamoyl-phosphate synthase small subunit 67 46970..47239 + 89 18159103 - PAE0086 - - hypothetical protein 67 1151396..1151905 + 169 18160493 - PAE1958 - - conserved within P. aerophilum 67 1886180..1887397 + 405 18161439 - PAE3167 - - hypothetical protein 67 1893887..1894225 + 112 18161445 - PAE3176 - - "conserved within P. aerophilum part 1, authentic frameshift" 68 390568..390930 - 120 18159552 - PAE0710 - - conserved hypothetical protein 68 962325..963326 - 333 18160260 - PAE1645 - - transcription initiation factor IIB (TFIIB) 68 1143009..1143791 - 260 18160481 - PAE1941 - - "chorismate mutase, conjectural" 68 2029927..2030595 - 222 18161614 - PAE3393 - - hypothetical protein 70 457293..458678 - 461 18159642 - PAE0819 - - pyruvate kinase 72 889095..889970 + 291 18160164 - PAE1522 - - hypothetical protein 72 934535..935215 - 226 18160219 - PAE1595 - - hypothetical protein 72 935287..937755 + 822 18160220 - PAE1597 - - aminopeptidase 72 994202..994486 - 94 18160299 - PAE1696 - - paREP2b 72 994558..994905 + 115 18160301 - PAE1698 - - paREP2a 73 112713..113093 - 126 18159190 - PAE0213 - - hypothetical protein 73 661906..662175 - 89 18159875 - PAE1118 - - "paREP1, authentic frameshift" 73 1316157..1316435 - 92 18160710 - PAE2229 - - paREP2a 73 1316508..1317998 + 496 18160711 - PAE2230 - - paREP2b 75 734235..734879 + 214 18159970 - PAE1263 - - "molybdopterin oxidoreductase, iron-sulfur binding subunit" 75 1840707..1841369 - 220 18161378 - PAE3092 - - "DNA-(apurinic or apyrimidinic site) lyase, conjectural" 75 2087000..2087665 + 221 18161677 - PAE3472 - - ribosomal protein S3 78 252540..252743 + 67 18159373 - PAE0458 - - hypothetical protein 78 1962668..1962988 - 106 18161525 - PAE3271 - - DNA-directed RNA polymerase subunit 79 231720..231935 + 71 18159350 - PAE0424a - - hypothetical protein 79 1947673..1948401 + 242 18161509 - PAE3251 - - hypothetical protein 80 74251..74508 + 85 18159136 - PAE0131 - - hypothetical protein 80 636089..636517 + 142 18159849 - PAE1081 - - P. aerophilum family 70 protein 80 1731685..1731846 + 53 18161237 - PAE2916 - - hypothetical protein 81 167482..167952 - 156 18159258 - PAE0298 - - paREP2a 81 168033..169259 + 408 18159259 - PAE0299 - - paREP2b 81 1796296..1796508 - 70 18161322 - PAE3016 - - hypothetical protein 81 1969958..1970380 + 140 18161534 - PAE3284 - - conserved hypothetical protein 83 571923..572147 + 74 18159772 - PAE0979 - - hypothetical protein 83 689199..692819 - 1206 18159914 - PAE1180 - - paREP2b 83 692902..693822 + 306 18159916 - PAE1181 - - paREP2a 84 1542038..1543165 - 375 18160986 - PAE2587 - - "cobyrinic acid a,c-diamide synthase (cbiA) part 2, authentic frameshift" 84 2117092..2118300 - 402 18161722 - PAE3532 - - hypothetical protein 85 29077..30612 + 511 18159082 - PAE0061 - - "extracellular solute binding protein, conjectural" 86 524593..524664 + 23 18159710 - PAE0908a - - hypothetical protein 88 908727..909746 - 339 18160188 - PAE1555 - - dolichol-phosphate mannosyltransferase 88 909834..910859 + 341 18160190 - PAE1557 - - "P. aerophilum family 417, putative ATP binding" 88 1367941..1369026 + 361 18160768 - PAE2301 - - "ABC transporter ATP-binding component, degenerate" 90 1669151..1669354 - 67 18161158 - PAE2823 - - hypothetical protein 91 882559..882759 + 66 18160153 - PAE1509 - - hypothetical protein 92 929707..929976 - 89 18160211 - PAE1583 - - paREP2a 92 2103787..2103987 + 66 18161705 - PAE3506 - - hypothetical protein 93 940301..940609 + 102 18160230 - PAE1608 - - paREP2a 94 72118..73725 + 535 18159134 - PAE0128 - - conserved hypothetical protein 94 140551..140814 + 87 18159220 - PAE0253 - - "P. aerophilum family 562 protein, associated with P. aerophilum family 577, degenerate" 94 1173680..1174552 + 290 18160521 - PAE1995 - - 3-isopropylmalate dehydrogenase (leuB) 94 1814958..1815947 - 329 18161348 - PAE3051 - - hypothetical protein 95 1679360..1681447 - 695 18161173 - PAE2840 - - "molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift" 96 697721..697951 - 76 18159922 - PAE1188 - - hypothetical protein 96 1571185..1571745 - 186 18161025 - PAE2641 - - hypothetical protein 97 1862107..1863570 - 487 18161407 - PAE3127 - - "P. aerophilum family 68 protein, part 2, authentic frameshift" 98 976417..976587 - 56 18160275 - PAE1665 - - paREP2b 98 976685..976810 + 41 18160276 - PAE1667 - - paREP2a 100 385708..385875 + 55 18159545 - PAE0700 - - hypothetical protein 100 1047613..1048119 - 168 18160366 - PAE1782 - - ribosomal protein L22 101 1136146..1136949 - 267 18160473 - PAE1929 - - transketolase (N terminal section) 103 524767..525168 + 133 18159711 - PAE0909 - - conserved within P. aerophilum 103 1163002..1163280 + 92 18160508 - PAE1978 - - DNA-directed RNA polymerase subunit L (rpoL) 103 1645709..1646029 + 106 18161122 - PAE2777 - - hypothetical protein 104 1313819..1313938 - 39 18160705 - PAE2222a - - hypothetical protein 105 515091..516035 + 314 18159699 - PAE0893 - - chorismate mutase/prephenate dehydratase (P-protein) 105 800977..801540 + 187 18160041 - PAE1347 - - conserved within P. aerophilum 105 1535352..1536011 - 219 18160976 - PAE2573 - - uroporphyrin-III C-methyltransferase 105 1827370..1827465 - 31 18161362 - PAE3075 - - paREP2b 106 1081006..1081740 - 244 18160410 - PAE1837 - - conserved hypothetical protein 108 228549..228746 + 65 18159345 - PAE0418 - - hypothetical protein 109 538086..539666 - 526 18159730 - PAE0931 - - hypothetical protein 109 2121046..2121861 - 271 18161725 - PAE3538 - - hypothetical protein 110 948996..949355 - 119 18160238 - PAE1618 - - paREP2a 110 949465..950037 + 190 18160239 - PAE1619 - - paREP2b 111 205731..205877 + 48 18159307 - PAE0364 - - paREP2a 111 1231206..1231751 + 181 18160595 - PAE2085 - - "peroxiredoxin, probable" 111 2031561..2033282 - 573 18161617 - PAE3399 - - conserved within P. aerophilum 112 184519..185967 - 482 18159282 - PAE0329 - - conserved hypothetical protein 112 199877..200164 - 95 18159300 - PAE0351 - - hypothetical protein 113 1360556..1360687 + 43 18160761 - PAE2294 - - hypothetical protein 114 1147898..1148155 - 85 18160486 - PAE1949 - - paREP11 116 1802425..1803375 - 316 18161329 - PAE3027 - - conserved hypothetical protein 118 260079..260423 + 114 18159385 - PAE0473 - - hypothetical protein 118 1073733..1073909 - 58 18160398 - PAE1823 - - "conserved within P. aerophilum part 2, authentic frameshift" 119 173878..174126 - 82 18159269 - PAE0312 - - conserved within P. aerophilum 121 93587..94363 + 258 18159173 - PAE0180 - - P. aerophilum family 577 protein 122 251058..252212 - 384 18159371 - PAE0455 - - "conserved within P. aerophilum, degenerate" 122 1127679..1128632 + 317 18160464 - PAE1916 - - hypothetical protein 123 38499..39287 + 262 18159092 - PAE0070 - - hypothetical protein 123 276685..277419 - 244 18159409 - PAE0512 - - hypothetical protein 123 702031..702585 - 184 18159928 - PAE1197 - - hypothetical protein 125 1239626..1239766 + 46 18160609 - PAE2106 - - paREP2a 125 1635846..1636031 + 61 18161110 - PAE2756 - - "conserved within P. aerophilum, degenerate" 128 969597..972524 - 975 18160268 - PAE1656 - - paREP2b 129 699818..700714 - 298 18159924 - PAE1191 - - paREP2b 130 1527584..1528414 - 276 18160964 - PAE2560 - - hypothetical protein 131 1321837..1322787 - 316 18160717 - PAE2238 - - conserved protein (possible primase) 131 1446972..1447133 - 53 18160864 - PAE2427 - - hypothetical protein 133 638148..638492 - 114 18159852 - PAE1086 - - hypothetical protein 133 1108868..1109605 + 245 18160435 - PAE1876 - - conserved within P. aerophilum 134 954039..954791 + 250 18160246 - PAE1627 - - hypothetical protein 135 124738..124851 - 37 18159204 - PAE0228 - - hypothetical protein 135 1897231..1897344 - 37 18161451 - PAE3183 - - hypothetical protein 136 271587..271790 + 67 18159403 - PAE0499 - - hypothetical protein 137 1485788..1485991 + 67 18160908 - PAE2481a - - hypothetical protein 138 113166..113483 - 105 18159191 - PAE0214 - - hypothetical protein 138 286156..286281 + 41 18159421 - PAE0538 - - conserved within P. aerophilum 138 1644153..1644632 - 159 18161120 - PAE2773 - - conserved hypothetical protein 139 885579..886106 - 175 18160157 - PAE1514 - - paREP2b 140 1017035..1018066 - 343 18160331 - PAE1736 - - beta-glucosidase 141 259081..259293 - 70 18159381 - PAE0468 - - hypothetical protein 142 1885991..1886113 + 40 18161438 - PAE3166 - - paREP2a 146 979203..981128 - 641 18160280 - PAE1671 - - paREP2b 146 981274..981384 + 36 18160281 - PAE1672 - - paREP2a 146 1261160..1261300 + 46 18160634 - PAE2136 - - paREP2a 146 1496570..1497208 - 212 18160923 - PAE2503 - - "conserved hypothetical protein, frameshift" 146 2062651..2063100 - 149 18161650 - PAE3441 - - "conserved hypothetical protein part 1, authentic frameshift" 147 7672..7767 - 31 18159052 - PAE0016 - - hypothetical protein 147 7914..8318 + 134 18159053 - PAE0017 - - conserved hypothetical protein 147 532338..533753 - 471 18159720 - PAE0922 - - conserved hypothetical protein 147 852149..852436 + 95 18160109 - PAE1437 - - hypothetical protein 147 860907..861059 - 50 18160120 - PAE1454 - - paREP2a 149 1172492..1173586 + 364 18160520 - PAE1993 - - 2-isopropylmalate synthase (leuA) with possible unusual start codon 150 449983..450402 - 139 18159631 - PAE0809 - - hypothetical protein 150 725307..726110 + 267 18159958 - PAE1240 - - ribosomal protein S6 modification protein (rimK) 151 1940801..1940983 - 60 18161498 - PAE3239 - - hypothetical protein 152 284869..285303 - 144 18159418 - PAE0534 - - "P. aerophilum family 1964 protein, degenerate" 152 703671..703901 - 76 18159931 - PAE1200 - - hypothetical protein 152 704053..704322 + 89 18159932 - PAE1201 - - paREP2a 152 861756..862166 - 136 18160123 - PAE1461 - - hypothetical protein 153 487416..487568 + 50 18159666 - PAE0845 - - paREP2a 154 1196417..1196824 - 135 18160551 - PAE2032 - - paREP11 155 1168139..1169476 - 445 18160515 - PAE1986 - - 2-isopropylmalate synthase (leuA) with possible unusual start codon 157 86646..86717 + 23 18159161 - PAE0164a - - hypothetical protein 158 261049..261144 - 31 18159387 - PAE0476 - - hypothetical protein 158 710379..710756 - 125 18159939 - PAE1213 - - paREP2a 158 1251033..1251410 - 125 18160624 - PAE2127 - - paREP2a 158 1994267..1994467 - 66 18161569 - PAE3330 - - hypothetical protein 161 838426..838998 + 190 18160086 - PAE1404 - - hypothetical protein 161 1034986..1035363 - 125 18160352 - PAE1768 - - paREP2a 161 1068564..1070129 + 521 18160394 - PAE1816 - - hypothetical protein 164 849549..849719 - 56 18160103 - PAE1430 - - conserved within P. aerophilum 168 630955..633108 + 717 18159846 - PAE1077 - - P. aerophilum family 66 protein 170 730871..731941 + 356 18159966 - PAE1252 - - conserved hypothetical protein 173 1942935..1943744 + 269 18161502 - PAE3244 - - "chromosome partitioning ATPase, parA family protein, conjectural" 180 598946..599557 + 203 18159806 - PAE1022 - - "thiamine-monophosphate kinase part 2, authentic frameshift" 180 1907253..1911080 - 1275 18161463 - PAE3198 - - "ATP-dependant helicase, probable" 180 2070160..2070462 - 100 18161656 - PAE3450 - - hypothetical protein 181 1077809..1078321 + 170 18160404 - PAE1828 - - paREP13 182 225611..225922 + 103 18159337 - PAE0407 - - paREP8 182 982330..982563 - 77 18160283 - PAE1674 - - hypothetical protein 182 1828771..1828959 + 62 18161364 - PAE3077 - - hypothetical protein 183 1451349..1451696 - 115 18160872 - PAE2439 - - conserved within P. aerophilum 185 844477..844605 - 42 18160096 - PAE1420 - - hypothetical protein 185 1348265..1350649 + 794 18160751 - PAE2280 - - conserved hypothetical protein 186 2128919..2129365 - 148 18161735 - PAE3550 - - hypothetical protein 187 1499696..1499908 + 70 18160928 - PAE2509 - - paREP7 187 1541596..1541847 + 83 18160985 - PAE2584 - - paREP1 187 1659753..1659827 + 24 18161145 - PAE2804a - - "paREP8, degenerate" 190 945687..945854 - 55 18160236 - PAE1616 - - hypothetical protein 190 946044..948989 + 981 18160237 - PAE1617 - - isoleucyl-tRNA synthetase 195 1109800..1110477 + 225 18160436 - PAE1878 - - "ATP binding protein, degenerate" 196 619442..620182 - 246 18159832 - PAE1056 - - thiF/moeB/hesA family protein 196 715015..715653 - 212 18159942 - PAE1216 - - ribonuclease HII (rnhB) 199 1065347..1065442 - 31 18160389 - PAE1810 - - paREP2a 200 1030363..1031967 - 534 18160346 - PAE1762 - - "iron-sulfur binding reductase, probable" 204 1640019..1640171 + 50 18161116 - PAE2766 - - hypothetical protein 206 985368..985931 + 187 18160290 - PAE1683 - - hypothetical protein 206 1191710..1192045 - 111 18160546 - PAE2027 - - "paREP10, authentic frameshift" 208 127002..127232 + 76 18159207 - PAE0235 - - hypothetical protein 209 1332872..1334065 + 397 18160729 - PAE2251 - - "aspartate aminotransferase (aspC), conjectural" 210 1583072..1586575 - 1167 18161040 - PAE2662 - - formate dehydrogenase alpha subunit 213 39500..39829 + 109 18159093 - PAE0073 - - hypothetical protein 215 843676..844065 + 129 18160094 - PAE1418 - - hypothetical protein 216 171399..171551 - 50 18159264 - PAE0305 - - conserved hypothetical protein 218 439982..440584 + 200 18159617 - PAE0791 - - conserved hypothetical protein 221 2120034..2120825 - 263 18161724 - PAE3535 - - hypothetical protein 222 225966..226175 - 69 18159338 - PAE0409 - - hypothetical protein 222 226397..226648 + 83 18159339 - PAE0410 - - hypothetical protein 223 847981..848883 + 300 18160101 - PAE1427 - - arsenical pump-driving ATPase 225 914689..914994 - 101 18160196 - PAE1563 - - paREP2a 228 169487..169972 + 161 18159260 - PAE0301 - - hypothetical protein 228 1684788..1685369 - 193 18161183 - PAE2853 - - paREP6 228 1685597..1686577 + 326 18161184 - PAE2855 - - P. aerophilum family 1964 protein 228 2163904..2164227 - 107 18161779 - PAE3605 - - conserved within P. aerophilum 234 138129..138272 - 47 18159216 - PAE0247 - - hypothetical protein 235 1697172..1699184 - 670 18161197 - PAE2867 - - acetyl-coenzyme A synthetase 237 1826870..1827133 - 87 18161361 - PAE3072 - - paREP2b 240 142112..143281 - 389 18159223 - PAE0257 - - "tryptophan synthase beta subunit (trpB), authentic frameshift" 241 842580..842750 - 56 18160091 - PAE1413 - - "paREP6, authentic frameshift" 241 1314042..1314128 - 28 18160706 - PAE2222b - - hypothetical protein 242 2183638..2183760 + 40 18161800 - PAE3628 - - conserved within P. aerophilum 243 1471..2397 - 308 18159043 - PAE0005 - - "peptidase, putative" 243 741680..742891 + 403 18159976 - PAE1269 - - conserved hypothetical protein 244 1708785..1709735 + 316 18161212 - PAE2884 - - argininosuccinate synthase (argG) 248 213289..213894 + 201 18159316 - PAE0374 - - conserved hypothetical protein 255 1266345..1266539 - 64 18160643 - PAE2148 - - hypothetical protein 255 1660082..1660699 + 205 18161147 - PAE2806 - - conserved hypothetical protein 256 572963..574408 + 481 18159774 - PAE0983 - - conserved hypothetical protein 256 1264390..1264566 + 58 18160639 - PAE2142 - - hypothetical protein 257 1519215..1519691 + 158 18160953 - PAE2546 - - paREP11 268 543795..544376 + 193 18159735 - PAE0937 - - hypothetical protein 270 183602..184522 + 306 18159281 - PAE0328 - - thiamine transport ATP-binding protein 271 1264883..1265122 - 79 18160640 - PAE2144 - - conserved within P. aerophilum 271 2197261..2198082 + 273 18161818 - PAE3650 - - conserved protein 272 896383..896970 - 195 18160173 - PAE1536 - - conserved protein (possible dual specificity phosphatase) 275 1682588..1682845 - 85 18161176 - PAE2844 - - hypothetical protein 282 2046236..2046379 - 47 18161632 - PAE3419 - - paREP2b 283 71097..71363 + 88 18159132 - PAE0124 - - hypothetical protein 287 1103588..1103932 + 114 18160427 - PAE1864 - - paREP7 291 581287..581724 + 145 18159784 - PAE0993 - - conserved within P. aerophilum 295 129407..133126 + 1239 18159211 - PAE0242 - - hypothetical protein 296 849158..849253 - 31 18160102 - PAE1429 - - hypothetical protein 301 219219..219353 - 44 18159325 - PAE0390 - - "paREP1, degenerate" 301 219654..219962 + 102 18159326 - PAE0391a - - "conserved protein, degenerate" 302 1376017..1377216 + 399 18160777 - PAE2315 - - "aminotransferase, class I" 311 804233..804709 + 158 18160046 - PAE1355 - - cytochrome C oxidase subunit II 312 1701309..1701536 - 75 18161201 - PAE2872 - - conserved within P. aerophilum 312 1701848..1702129 + 93 18161202 - PAE2874 - - hypothetical protein 316 2108947..2109192 - 81 18161712 - PAE3516 - - hypothetical protein 317 241225..242160 + 311 18159363 - PAE0439 - - dolichol-phosphate mannosyltransferase 322 1327074..1327646 - 190 18160723 - PAE2244 - - hypothetical protein 324 2122854..2123009 - 51 18161727 - PAE3541 - - hypothetical protein 324 2123333..2123773 + 146 18161729 - PAE3542 - - hypothetical protein 328 1788559..1788708 + 49 18161310 - PAE3002 - - paREP2a 331 571256..571609 + 117 18159770 - PAE0976 - - hypothetical protein 333 276135..276323 + 62 18159408 - PAE0510 - - hypothetical protein 343 322879..322956 - 25 18159465 - PAE0602a - - hypothetical protein 345 232901..233893 + 330 18159354 - PAE0430 - - glycosyltransferase (type 1) 348 2159730..2160857 - 375 18161776 - PAE3602 - - conserved hypothetical protein 349 1238587..1238937 + 116 18160607 - PAE2104 - - hypothetical protein 355 1009425..1009997 + 190 18160321 - PAE1723 - - "conserved within P. aerophilum, authentic frameshift" 358 2124131..2125225 + 364 18161730 - PAE3544 - - paREP2b 366 1046951..1047247 - 98 18160365 - PAE1780a - - "conserved protein part 1, authentic frameshift" 367 1154773..1154850 - 25 18160497 - PAE1966a - - hypothetical protein 368 244436..245560 + 374 18159367 - PAE0442 - - glycosyltransferase (type 1) 368 1309784..1311367 + 527 18160701 - PAE2217 - - DNA topoisomerase VI (type II ) subunit b 382 1496567..1496764 + 65 18160922 - PAE2500 - - paREP13 391 264309..264434 - 41 18159390 - PAE0479 - - hypothetical protein 399 521829..522077 + 82 18159705 - PAE0903 - - hypothetical protein 401 1112828..1113727 - 299 18160440 - PAE1884 - - "phosphate permease, conjectural" 409 732350..732874 + 174 18159967 - PAE1257 - - "conserved hypothetical protein, degenerate" 414 165416..165508 - 30 18159253 - PAE0294a - - hypothetical protein 414 165922..166062 + 46 18159254 - PAE0294b - - hypothetical protein 417 454218..455327 + 369 18159638 - PAE0815 - - "serine/threonine protein kinase, putative" 418 25140..25364 - 74 18159078 - PAE0051 - - hypothetical protein 422 76373..76714 - 113 18159141 - PAE0137 - - hypothetical protein 424 2050011..2050607 + 198 18161636 - PAE3424 - - "conserved hypothetical protein, degenerate" 426 84327..84497 - 56 18159157 - PAE0160 - - hypothetical protein 428 786815..786934 - 39 18160023 - PAE1325 - - hypothetical protein 428 787362..787487 + 41 18160025 - PAE1326 - - hypothetical protein 432 1634659..1634985 + 108 18161107 - PAE2753 - - hypothetical protein 435 81485..81628 + 47 18159150 - PAE0150 - - hypothetical protein 435 1004477..1004593 - 38 18160315 - PAE1717a - - hypothetical protein 435 1005028..1007094 + 688 18160317 - PAE1718 - - P. aerophilum family 66 protein 450 301759..301935 - 58 18159438 - PAE0559 - - hypothetical protein 463 1913015..1914406 - 463 18161467 - PAE3201 - - C-5 cytosine-specific DNA methylase 467 2151986..2152405 - 139 18161767 - PAE3588 - - conserved protein with 2 CBS domains 467 2152872..2153642 + 256 18161768 - PAE3592 - - "acetyl-coenzyme A synthetase, degenerate" 468 1706071..1706451 + 126 18161208 - PAE2879 - - hypothetical protein 469 175597..176487 + 296 18159272 - PAE0315 - - ABC-2 type transport system ATP-binding protein 479 1486470..1486799 + 109 18160910 - PAE2483 - - hypothetical protein 483 518173..518388 - 71 18159701 - PAE0894a - - hypothetical protein 485 1522164..1522898 + 244 18160959 - PAE2552 - - conserved hypothetical protein 508 1076402..1077628 + 408 18160403 - PAE1827 - - paREP12 533 867201..868841 - 546 18160132 - PAE1478 - - hypothetical protein 536 2101487..2101543 - 18 18161700 - PAE3501a - - hypothetical protein 540 267069..267302 + 77 18159396 - PAE0487 - - hypothetical protein 547 1283354..1283770 + 138 18160666 - PAE2175 - - hypothetical protein 554 146662..147021 + 119 18159229 - PAE0265 - - hypothetical protein 559 1218466..1218582 - 38 18160579 - PAE2066 - - paREP2b 585 127222..127434 - 70 18159208 - PAE0237 - - hypothetical protein 594 1615483..1617084 - 533 18161085 - PAE2724 - - "P. aerophilum family 66 protein, interruption-C" 598 1282069..1282431 + 120 18160664 - PAE2171 - - "paREP2b, degenerate" 602 1301881..1302198 - 105 18160689 - PAE2202 - - ribosomal protein L37 634 1263016..1263324 - 102 18160637 - PAE2138a - - hypothetical protein 634 1263958..1264134 + 58 18160638 - PAE2140 - - hypothetical protein 643 622637..623998 + 453 18159835 - PAE1064 - - "sulfonate transport permease protein, putative" 643 1090039..1090698 + 219 18160419 - PAE1850 - - "rRNA intron-encoded homing endonuclease, possible" 652 621719..621994 + 91 18159834 - PAE1060 - - partial recF homolog 711 300890..301762 + 290 18159437 - PAE0558 - - conserved within P. aerophilum 713 1643440..1643712 + 90 18161119 - PAE2770 - - "paREP12, degenerate" 743 265267..265407 - 46 18159393 - PAE0482 - - hypothetical protein 780 1494605..1495516 + 303 18160919 - PAE2498 - - hypothetical protein 817 255103..255459 + 118 18159376 - PAE0462 - - hypothetical protein 826 2185741..2186796 - 351 18161803 - PAE3632 - - hypothetical protein 837 1870244..1870837 - 197 18161418 - PAE3141 - - hypothetical protein 914 275620..275802 + 60 18159407 - PAE0507 - - hypothetical protein 944 604504..605109 + 201 18159813 - PAE1031 - - conserved within P. aerophilum 945 160952..161050 - 32 18159246 - PAE0286 - - paREP2b 988 380353..380580 - 75 18159538 - PAE0692 - - hypothetical protein with partial (eukaryotic) protein kinase domain 1535 273325..273663 + 112 18159404 - PAE0505 - - conserved within P. aerophilum 5876 94405..95193 - 262 18159174 - PAE0181 - - conserved hypothetical protein